Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.74□□□□□ -1.65
VRK1Q99986 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.74□□□□□ -1.65
VRK1Q99986 AC112191.3-201ENST00000604371 277 ntBASIC4.74□□□□□ -1.65
VRK1Q99986 AC211433.2-201ENST00000608433 387 ntBASIC4.74□□□□□ -1.65
VRK1Q99986 AC108747.1-201ENST00000609508 535 ntBASIC4.74□□□□□ -1.65
VRK1Q99986 AC131902.3-201ENST00000611767 581 ntBASIC4.74□□□□□ -1.65
VRK1Q99986 AC013476.2-201ENST00000614456 459 ntBASIC4.74□□□□□ -1.65
VRK1Q99986 AC009318.4-201ENST00000620496 486 ntBASIC4.74□□□□□ -1.65
VRK1Q99986 AL049536.1-201ENST00000625043 744 ntBASIC4.74□□□□□ -1.65
VRK1Q99986 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK1Q99986 AC099654.12-201ENST00000639868 649 ntBASIC4.74□□□□□ -1.65
VRK1Q99986 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK1Q99986 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VRK1Q99986 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VRK1Q99986 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VRK1Q99986 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK1Q99986 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK1Q99986 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
VRK1Q99986 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
VRK1Q99986 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VRK1Q99986 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
VRK1Q99986 NEAT1-202ENST00000501122 22743 ntBASIC4.74□□□□□ -1.65
VRK1Q99986 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.74□□□□□ -1.65
VRK1Q99986 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.74□□□□□ -1.65
VRK1Q99986 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VRK1Q99986 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK1Q99986 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK1Q99986 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK1Q99986 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.73□□□□□ -1.65
VRK1Q99986 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
VRK1Q99986 Z95327.2-201ENST00000414579 1873 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
VRK1Q99986 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK1Q99986 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VRK1Q99986 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
VRK1Q99986 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK1Q99986 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
VRK1Q99986 RNA5SP234-201ENST00000363916 119 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 RNU1-130P-201ENST00000363930 160 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 SNORA74A-201ENST00000364089 198 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 Y_RNA.582-201ENST00000391023 95 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 SNORD115.1-201ENST00000391109 76 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK1Q99986 RPS15AP40-201ENST00000419621 391 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 AC012065.2-201ENST00000421295 375 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 RAD23BP1-201ENST00000421404 1227 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 RIMKLBP2-201ENST00000424737 654 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 BX890604.2-201ENST00000427883 474 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 NPM1P34-201ENST00000428821 893 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 RPS20P1-201ENST00000434853 354 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 OR6D1P-201ENST00000436165 939 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 RPL7P36-201ENST00000444633 681 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK1Q99986 AL590365.1-201ENST00000450788 243 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK1Q99986 OR5G4P-201ENST00000525251 760 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.73□□□□□ -1.65
VRK1Q99986 AC122688.1-201ENST00000541494 223 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VRK1Q99986 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK1Q99986 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK1Q99986 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK1Q99986 AC084757.1-201ENST00000559987 490 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 RN7SL290P-201ENST00000578661 300 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 AL353997.4-201ENST00000586196 166 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 AC022916.3-201ENST00000592961 742 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 BBIP1P1-201ENST00000602999 279 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.73□□□□□ -1.65
VRK1Q99986 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK1Q99986 AP001506.1-201ENST00000615444 211 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 AL118522.2-201ENST00000616045 615 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK1Q99986 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.73□□□□□ -1.65
VRK1Q99986 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.73□□□□□ -1.65
VRK1Q99986 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK1Q99986 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK1Q99986 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK1Q99986 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK1Q99986 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VRK1Q99986 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
VRK1Q99986 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK1Q99986 C4BPAP1-201ENST00000415474 1893 ntBASIC4.73□□□□□ -1.65
VRK1Q99986 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
VRK1Q99986 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK1Q99986 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VRK1Q99986 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.72□□□□□ -1.65
VRK1Q99986 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VRK1Q99986 AL034549.2-201ENST00000618285 3373 ntBASIC4.72□□□□□ -1.65
VRK1Q99986 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VRK1Q99986 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK1Q99986 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK1Q99986 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK1Q99986 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK1Q99986 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VRK1Q99986 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VRK1Q99986 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VRK1Q99986 RNU6-343P-201ENST00000364709 104 ntBASIC4.72□□□□□ -1.65
VRK1Q99986 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK1Q99986 RNU6-533P-201ENST00000384144 107 ntBASIC4.72□□□□□ -1.65
VRK1Q99986 RNA5SP241-201ENST00000391326 114 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms