Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RPL12P9-201ENST00000412942 488 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AC008850.1-201ENST00000427546 362 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 USP9YP9-201ENST00000429406 715 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AC073464.1-201ENST00000429823 534 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AL035458.1-201ENST00000433096 585 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 TCEA1P1-201ENST00000449716 880 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 snoU13.20-201ENST00000459180 104 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 MTND1P16-201ENST00000465177 898 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 MTCO3P9-201ENST00000506989 781 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 IGHV3-32-201ENST00000519182 355 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AK6P1-201ENST00000540219 478 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AL390334.1-201ENST00000556395 450 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AC006960.3-201ENST00000561845 705 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 MIR3934-201ENST00000579806 107 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AP000942.4-201ENST00000604811 241 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AL592494.3-201ENST00000609485 464 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AC120349.2-201ENST00000625002 298 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AC073055.1-201ENST00000456901 1621 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 DCAF13P3-201ENST00000561147 1334 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 Y_RNA.160-201ENST00000363677 92 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 Y_RNA.394-201ENST00000383942 103 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 SNORA51.8-201ENST00000384234 132 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 Y_RNA.529-201ENST00000384586 119 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 COX5BP7-201ENST00000414780 274 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC01347-201ENST00000417964 355 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AC019050.1-201ENST00000418508 492 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 RPS26P13-201ENST00000419030 330 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AC009237.2-201ENST00000421358 284 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 BX323845.1-201ENST00000432417 179 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 RHOT1P3-201ENST00000436571 331 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 HMGB1P16-201ENST00000447155 540 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 RPL31P44-201ENST00000447680 377 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 PRPF38AP1-201ENST00000451976 933 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 COX6B1P2-201ENST00000489624 230 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 MTCYBP18-201ENST00000501056 747 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AC114786.4-201ENST00000508771 728 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AC018442.3-201ENST00000523025 183 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 BRD9P1-201ENST00000529855 560 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AC040958.1-201ENST00000561102 201 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AC091489.2-201ENST00000566263 604 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 OR1F2P-201ENST00000570470 933 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AL353726.1-201ENST00000614041 1000 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 AC124864.2-201ENST00000624736 186 ntBASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP1Q96SZ6 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CDK5RAP1Q96SZ6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms