Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNA5SP424-201ENST00000390988 115 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 HMGB1P10-201ENST00000395823 563 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 CCNB2P1-201ENST00000399411 1150 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 SNORA11.1-201ENST00000408133 129 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 HMGB3P20-201ENST00000417997 600 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 TCEA1P2-201ENST00000420496 906 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 AL139247.1-201ENST00000422768 325 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL21A1Q96P44 ZNF965P-201ENST00000432501 817 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AL035458.1-201ENST00000433096 585 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC007688.1-201ENST00000475592 759 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 RPL30P11-201ENST00000495304 339 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 FTH1P24-201ENST00000503502 462 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC006960.3-201ENST00000561845 705 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC067852.4-201ENST00000590314 478 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 KLKP1-201ENST00000595979 403 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 AL163642.2-201ENST00000604722 1019 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC079610.2-201ENST00000604818 690 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC245389.1-201ENST00000605141 529 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AL365503.1-201ENST00000605247 905 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC008121.2-201ENST00000614647 523 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC243756.2-201ENST00000618406 463 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 AC009452.1-201ENST00000640823 606 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL21A1Q96P44 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL21A1Q96P44 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL21A1Q96P44 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL21A1Q96P44 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL21A1Q96P44 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL21A1Q96P44 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL21A1Q96P44 SNORD115-48-201ENST00000364764 76 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 RNA5SP171-201ENST00000391071 115 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 AL590704.1-201ENST00000402856 794 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 HMGB1P13-201ENST00000406019 642 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 RN7SKP159-201ENST00000410657 292 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL21A1Q96P44 NDUFB1P1-201ENST00000435191 180 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 MTND5P8-201ENST00000449817 1083 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 RPL23AP14-201ENST00000468281 468 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 PCBP2P3-201ENST00000509726 843 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL21A1Q96P44 SNORA48.9-201ENST00000516419 162 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 PDCL2P2-201ENST00000533651 189 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 AL121766.1-201ENST00000547436 487 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 AC005242.1-201ENST00000585658 438 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 PCNAP1-202ENST00000595299 752 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 AC010680.4-201ENST00000605334 543 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 AL162233.1-201ENST00000620014 944 ntBASIC3.46□□□□□ -1.86
COL21A1Q96P44 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
COL21A1Q96P44 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL21A1Q96P44 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL21A1Q96P44 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL21A1Q96P44 AC138393.1-206ENST00000540997 1886 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 SNORD51.1-201ENST00000365405 77 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 RN7SKP202-201ENST00000410439 330 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL21A1Q96P44 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 TRIM60P13-201ENST00000432350 1283 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 HMGB3P8-201ENST00000449709 577 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 AL133162.1-201ENST00000463228 453 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms