Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC083923.1-201ENST00000523708 376 ntBASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.33□□□□□ -1.72
RTP4Q96DX8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.33□□□□□ -1.72
RTP4Q96DX8 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC025260.1-201ENST00000548858 430 ntBASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC063950.1-201ENST00000552036 308 ntBASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC007599.1-201ENST00000568688 1174 ntBASIC4.33□□□□□ -1.72
RTP4Q96DX8 MIR3160-1-201ENST00000577972 85 ntBASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC072039.2-201ENST00000608883 439 ntBASIC4.33□□□□□ -1.72
RTP4Q96DX8 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC006840.1-201ENST00000623069 542 ntBASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC091965.5-201ENST00000624785 342 ntBASIC4.33□□□□□ -1.72
RTP4Q96DX8 AC010608.2-201ENST00000624830 470 ntBASIC4.33□□□□□ -1.72
RTP4Q96DX8 U6.107-201ENST00000637108 79 ntBASIC4.33□□□□□ -1.72
RTP4Q96DX8 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.33□□□□□ -1.72
RTP4Q96DX8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTP4Q96DX8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTP4Q96DX8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTP4Q96DX8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTP4Q96DX8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTP4Q96DX8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC138393.1-206ENST00000540997 1886 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AP000526.1-201ENST00000603308 1388 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 METTL21EP-201ENST00000298105 713 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 Y_RNA.51-201ENST00000362725 102 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 RNU1-14P-201ENST00000362759 152 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 Y_RNA.126-201ENST00000363382 111 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTP4Q96DX8 RNU6-549P-201ENST00000384433 107 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AL121834.1-202ENST00000404494 277 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AL021407.1-201ENST00000404531 386 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 RN7SKP235-201ENST00000410662 305 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 TCEA1P4-201ENST00000415066 844 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 RPL17P36-201ENST00000420302 549 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 MTCO2P7-201ENST00000446518 666 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 EEF1A1P1-201ENST00000447052 739 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 RPL7P48-201ENST00000461513 746 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AP000942.1-201ENST00000463969 747 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC011979.1-201ENST00000472300 483 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC108734.3-201ENST00000481241 1165 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC010198.2-201ENST00000550612 259 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 DUXAP1-201ENST00000556632 463 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC090515.3-201ENST00000560431 315 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 BNIP3P5-201ENST00000562290 498 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC027104.1-201ENST00000563702 681 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC103987.3-201ENST00000582071 292 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 MRPS35P3-201ENST00000603189 709 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC008638.3-201ENST00000603341 463 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC135507.1-201ENST00000607214 561 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AP000238.1-201ENST00000608759 426 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AL122125.1-201ENST00000616999 600 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 AP000843.1-201ENST00000624880 701 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTP4Q96DX8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTP4Q96DX8 TTC39DP-201ENST00000416781 1688 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTP4Q96DX8 AC092162.3-201ENST00000624511 1624 ntBASIC4.32□□□□□ -1.72
RTP4Q96DX8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTP4Q96DX8 AC015813.6-201ENST00000624409 5808 ntBASIC4.31□□□□□ -1.72
RTP4Q96DX8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms