Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 Y_RNA.226-201ENST00000364337 114 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 RNU6-304P-201ENST00000364855 107 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 ELOCP18-201ENST00000434209 337 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC025754.2-201ENST00000606491 432 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 CR382285.2-201ENST00000624662 1495 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 TAF9BP1-201ENST00000396646 746 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 RNU6-1231P-201ENST00000517185 103 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC008126.1-201ENST00000549019 480 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC023161.2-201ENST00000551218 780 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AL354760.1-201ENST00000608357 643 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AP000553.6-201ENST00000641242 118 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 SNORD9-201ENST00000362566 104 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 SRP72P2-201ENST00000344851 1979 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 SAGE2P-201ENST00000420011 2126 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC013470.3-201ENST00000420252 1194 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 HSPE1P27-201ENST00000430808 296 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC107083.1-201ENST00000439643 279 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC069285.2-201ENST00000440210 275 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 RPL7P59-201ENST00000447700 943 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC099563.1-201ENST00000456086 418 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 PSMC1P13-201ENST00000458195 985 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 MTCO1P9-201ENST00000505577 1534 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AL392088.2-201ENST00000637607 285 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 MIR4769-201ENST00000584126 77 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 RNU6-729P-201ENST00000384399 107 ntBASIC1.03□□□□□ -2.24
SYNE1Q8NF91 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 AL136131.1-201ENST00000406079 803 ntBASIC1.03□□□□□ -2.24
SYNE1Q8NF91 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 IGLVIV-53-201ENST00000520107 367 ntBASIC1.03□□□□□ -2.24
SYNE1Q8NF91 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 MIR3074-201ENST00000384885 81 ntBASIC1.03□□□□□ -2.24
SYNE1Q8NF91 RNA5SP424-201ENST00000390988 115 ntBASIC1.03□□□□□ -2.24
SYNE1Q8NF91 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 METTL15P1-201ENST00000481421 1045 ntBASIC1.03□□□□□ -2.24
SYNE1Q8NF91 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 RNU6-579P-201ENST00000516879 102 ntBASIC1.03□□□□□ -2.24
SYNE1Q8NF91 AC099489.2-201ENST00000574976 260 ntBASIC1.03□□□□□ -2.24
SYNE1Q8NF91 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 AL450489.1-201ENST00000612071 468 ntBASIC1.03□□□□□ -2.24
SYNE1Q8NF91 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 RIOK3P1-201ENST00000418778 1528 ntBASIC1.03□□□□□ -2.24
SYNE1Q8NF91 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE1Q8NF91 MOB1AP1-201ENST00000430903 535 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms