Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AL592494.2-201ENST00000425455 1548 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AF127577.6-201ENST00000623352 2191 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 MIR23A-201ENST00000385245 73 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 RPL32P23-201ENST00000397237 405 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC069218.2-201ENST00000411665 344 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC004022.2-201ENST00000413824 193 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 RPL36AP36-201ENST00000418616 301 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 CYCSP43-201ENST00000438233 310 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 Z95327.1-201ENST00000446082 482 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 PPIAP3-201ENST00000450588 505 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 HMGB1P5-202ENST00000451497 985 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 SUMO1P1-201ENST00000497904 306 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC008489.1-201ENST00000524271 483 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AL139174.1-201ENST00000531489 886 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC087499.8-201ENST00000578406 226 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 MIR5047-201ENST00000579212 100 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 BNIP3P22-201ENST00000593399 556 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC245128.3-201ENST00000594721 748 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC099676.1-201ENST00000608886 657 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 AC034229.5-201ENST00000624258 185 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 MIR4278-201ENST00000636094 69 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 MIR7153-201ENST00000637758 57 ntBASIC3.61□□□□□ -1.83
SNX31Q8N9S9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX31Q8N9S9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 RN7SKP202-201ENST00000410439 330 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AL031736.2-201ENST00000426573 787 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AL591419.1-201ENST00000427423 339 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC099563.1-201ENST00000456086 418 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 RN7SL132P-201ENST00000478131 296 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 HMGB1P3-201ENST00000502802 616 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 SAP18P1-201ENST00000512058 390 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 OR7E13P-201ENST00000526052 910 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 PDCL2P2-201ENST00000533651 189 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 MIR3186-201ENST00000577404 85 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 RN7SL703P-201ENST00000578485 302 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC018754.1-201ENST00000607486 925 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC090912.3-201ENST00000609775 533 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC105429.2-201ENST00000610567 517 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 LINC00216-201ENST00000623548 1126 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 U6.98-201ENST00000637157 84 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNX31Q8N9S9 AC007656.2-201ENST00000624902 4547 ntBASIC3.6□□□□□ -1.83
SNX31Q8N9S9 PWAR6-201ENST00000552334 4618 ntBASIC3.59□□□□□ -1.83
SNX31Q8N9S9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SNX31Q8N9S9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SNX31Q8N9S9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SNX31Q8N9S9 OR4A15-201ENST00000314706 1035 ntBASIC3.59□□□□□ -1.83
SNX31Q8N9S9 SNORA62.3-201ENST00000365110 153 ntBASIC3.59□□□□□ -1.83
SNX31Q8N9S9 MIR153-1-201ENST00000384914 90 ntBASIC3.59□□□□□ -1.83
SNX31Q8N9S9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SNX31Q8N9S9 CCNB2P1-201ENST00000399411 1150 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms