Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.37□□□□□ -1.71
ZNF549Q6P9A3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL592148.3-201ENST00000608771 2646 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC008033.1-201ENST00000216407 1162 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC067945.1-201ENST00000342609 618 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 RNU6-500P-201ENST00000362349 107 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 RNU1-108P-201ENST00000362556 161 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 RNU1-94P-201ENST00000362627 173 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 Y_RNA.41-201ENST00000362646 102 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 RNU6-249P-201ENST00000363016 102 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 Y_RNA.517-201ENST00000384551 106 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 MIR585-201ENST00000384887 94 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 DEFB108C-201ENST00000400154 252 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL663109.1-201ENST00000411498 844 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 TCEA1P4-201ENST00000415066 844 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 UBTFL3-201ENST00000418934 1024 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 EIF4EP1-201ENST00000422311 642 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 MTCO1P52-201ENST00000433928 531 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC234064.1-201ENST00000436312 247 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC002542.1-201ENST00000440683 193 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC114495.1-201ENST00000441274 436 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL929288.2-201ENST00000446368 407 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL162591.2-201ENST00000449634 317 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 TPMTP4-201ENST00000450749 678 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 DHFRP3-201ENST00000455595 559 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 RPL21P126-201ENST00000470049 478 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 RPS26P28-201ENST00000470806 348 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 UBTFL6-201ENST00000477929 1024 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC109486.1-201ENST00000486833 374 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 WBP1LP4-201ENST00000505043 344 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC079395.1-201ENST00000510981 262 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC010587.2-201ENST00000511727 448 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC091965.2-201ENST00000512324 613 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AGGF1P8-201ENST00000562979 1000 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC079171.1-201ENST00000568788 914 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC006539.2-201ENST00000601729 572 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC087241.4-201ENST00000612441 480 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC100793.4-201ENST00000613683 429 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AC121761.2-201ENST00000617300 689 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 STMN1P1-201ENST00000617809 440 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL607023.1-201ENST00000620045 248 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 AL160394.1-201ENST00000624765 724 ntBASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF549Q6P9A3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 U3.4-201ENST00000363352 213 ntBASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 Y_RNA.408-201ENST00000383987 102 ntBASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 Y_RNA.516-201ENST00000384541 124 ntBASIC4.35□□□□□ -1.71
ZNF549Q6P9A3 MIR3065-201ENST00000390137 79 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms