Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AC007619.2-201ENST00000605743 379 ntBASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AC243829.7-201ENST00000633081 225 ntBASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
RIF1Q5UIP0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AC079600.2-201ENST00000550076 130 ntBASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.1□□□□□ -1.91
RIF1Q5UIP0 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RIF1Q5UIP0 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.09□□□□□ -1.91
RIF1Q5UIP0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.09□□□□□ -1.91
RIF1Q5UIP0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
RIF1Q5UIP0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
RIF1Q5UIP0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RIF1Q5UIP0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RIF1Q5UIP0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RIF1Q5UIP0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RIF1Q5UIP0 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.09□□□□□ -1.91
RIF1Q5UIP0 CYCSP39-201ENST00000565821 309 ntBASIC3.09□□□□□ -1.91
RIF1Q5UIP0 AC103710.3-201ENST00000608157 948 ntBASIC3.09□□□□□ -1.91
RIF1Q5UIP0 AC103798.2-201ENST00000624292 632 ntBASIC3.09□□□□□ -1.91
RIF1Q5UIP0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RIF1Q5UIP0 HCFC2P1-201ENST00000392864 1592 ntBASIC3.09□□□□□ -1.92
RIF1Q5UIP0 MIR22-201ENST00000362190 85 ntBASIC3.09□□□□□ -1.92
RIF1Q5UIP0 RPS20P22-201ENST00000473700 357 ntBASIC3.09□□□□□ -1.92
RIF1Q5UIP0 DUXAP6-201ENST00000553858 601 ntBASIC3.09□□□□□ -1.92
RIF1Q5UIP0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.09□□□□□ -1.92
RIF1Q5UIP0 AC024153.1-201ENST00000603103 365 ntBASIC3.09□□□□□ -1.92
RIF1Q5UIP0 AL157817.1-201ENST00000614264 790 ntBASIC3.09□□□□□ -1.92
RIF1Q5UIP0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
RIF1Q5UIP0 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.09□□□□□ -1.92
RIF1Q5UIP0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.09□□□□□ -1.92
RIF1Q5UIP0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.08□□□□□ -1.92
RIF1Q5UIP0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 RPSAP41-201ENST00000439695 860 ntBASIC3.08□□□□□ -1.92
RIF1Q5UIP0 CKS1BP2-201ENST00000497342 240 ntBASIC3.08□□□□□ -1.92
RIF1Q5UIP0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 AC090286.3-201ENST00000573133 187 ntBASIC3.08□□□□□ -1.92
RIF1Q5UIP0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 AC068647.1-201ENST00000489539 2265 ntBASIC3.08□□□□□ -1.92
RIF1Q5UIP0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 ANP32BP2-201ENST00000454525 545 ntBASIC3.08□□□□□ -1.92
RIF1Q5UIP0 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.08□□□□□ -1.92
RIF1Q5UIP0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 SNORD15B-201ENST00000384714 146 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 AL359643.1-201ENST00000404109 423 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 AL591806.2-201ENST00000433122 173 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 RPL23AP23-201ENST00000452590 471 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 AC021205.1-201ENST00000468797 348 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 AC078814.3-201ENST00000553036 491 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 AC098826.3-201ENST00000603823 466 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 CBX1P4-201ENST00000439415 457 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RIF1Q5UIP0 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 YWHAZP1-201ENST00000556286 722 ntBASIC3.07□□□□□ -1.92
RIF1Q5UIP0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms