Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 MTND4LP22-201ENST00000508209 276 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 PTGES3P3-201ENST00000511479 482 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 FABP5P12-201ENST00000515543 389 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 RNU6-579P-201ENST00000516879 102 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 SYF2P1-201ENST00000550658 413 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC023161.2-201ENST00000551218 780 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC008507.1-201ENST00000587506 734 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AL355816.1-201ENST00000607951 118 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC090912.3-201ENST00000609775 533 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC019176.2-201ENST00000611579 315 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 MTND4P34-201ENST00000572715 1371 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 MTND5P3-201ENST00000438536 1800 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 RNA5SP42-201ENST00000364278 115 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC068538.1-201ENST00000376856 336 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 MIR320B1-201ENST00000390209 79 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 SOD2P1-201ENST00000396543 562 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 PPIAP31-201ENST00000405422 495 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 RN7SKP156-201ENST00000410308 342 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 NDUFB4P5-201ENST00000415445 361 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 GTF2IP23-201ENST00000423746 351 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 RSL24D1P6-201ENST00000426934 401 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 HMGB1P45-201ENST00000435986 653 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC009969.1-201ENST00000438726 172 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 RPL7P59-201ENST00000447700 943 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 RAB28P3-201ENST00000448325 597 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC104308.1-201ENST00000454621 333 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 RN7SL385P-201ENST00000468873 276 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC022034.3-201ENST00000471393 478 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC020893.1-201ENST00000502452 580 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 KCTD9P5-201ENST00000504141 1170 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 RN7SKP141-201ENST00000516167 338 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 RNU4-60P-201ENST00000517239 135 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 HIGD1AP5-201ENST00000529959 259 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 OR8R1P-201ENST00000543943 764 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC007224.1-201ENST00000564410 144 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 MIR4506-201ENST00000584693 77 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC006077.1-201ENST00000604746 343 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC004832.5-201ENST00000608677 401 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AL732618.1-201ENST00000623251 301 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 AC110801.1-201ENST00000623590 212 ntBASIC2.72□□□□□ -1.97
HIST1H1AQ02539 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.72□□□□□ -1.97
HIST1H1AQ02539 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.71□□□□□ -1.97
HIST1H1AQ02539 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.71□□□□□ -1.97
HIST1H1AQ02539 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AC007656.2-201ENST00000624902 4547 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms