Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC243773.3-201ENST00000613270 256 ntBASIC5.35□□□□□ -1.55
YBX1P67809 AL118522.2-201ENST00000616045 615 ntBASIC5.35□□□□□ -1.55
YBX1P67809 AC090527.3-201ENST00000619041 548 ntBASIC5.35□□□□□ -1.55
YBX1P67809 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.35□□□□□ -1.55
YBX1P67809 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.35□□□□□ -1.55
YBX1P67809 MIR1302-1-201ENST00000637932 143 ntBASIC5.35□□□□□ -1.55
YBX1P67809 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.35□□□□□ -1.55
YBX1P67809 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.35□□□□□ -1.55
YBX1P67809 MAPK10-338ENST00000641647 3362 ntBASIC5.35□□□□□ -1.55
YBX1P67809 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.35□□□□□ -1.55
YBX1P67809 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.35□□□□□ -1.55
YBX1P67809 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
YBX1P67809 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
YBX1P67809 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
YBX1P67809 LINC00561-201ENST00000565815 2738 ntBASIC5.34□□□□□ -1.55
YBX1P67809 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.34□□□□□ -1.55
YBX1P67809 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.34□□□□□ -1.55
YBX1P67809 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
YBX1P67809 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
YBX1P67809 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
YBX1P67809 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.34□□□□□ -1.55
YBX1P67809 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
YBX1P67809 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.34□□□□□ -1.55
YBX1P67809 SNORA58B-201ENST00000364259 136 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AL122016.1-201ENST00000403365 367 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AC211486.3-201ENST00000412694 621 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.34□□□□□ -1.55
YBX1P67809 VN1R36P-201ENST00000414936 291 ntBASIC5.34□□□□□ -1.55
YBX1P67809 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.34□□□□□ -1.55
YBX1P67809 AL445669.1-201ENST00000426743 755 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.34□□□□□ -1.55
YBX1P67809 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.34□□□□□ -1.55
YBX1P67809 AL627308.1-201ENST00000435693 821 ntBASIC5.34□□□□□ -1.55
YBX1P67809 SEPT14P3-201ENST00000439401 183 ntBASIC5.34□□□□□ -1.55
YBX1P67809 CBX1P1-201ENST00000440184 427 ntBASIC5.34□□□□□ -1.55
YBX1P67809 RPL17P49-201ENST00000443728 411 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AL732372.2-207ENST00000445840 183 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.34□□□□□ -1.55
YBX1P67809 MTCO1P27-201ENST00000448269 226 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.34□□□□□ -1.55
YBX1P67809 SEPT14P2-201ENST00000453405 183 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AZGP1P2-201ENST00000454506 345 ntBASIC5.34□□□□□ -1.55
YBX1P67809 RNU7-27P-201ENST00000459281 62 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AC093278.1-201ENST00000494700 600 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AC139783.2-201ENST00000504847 1145 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.34□□□□□ -1.55
YBX1P67809 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.34□□□□□ -1.55
YBX1P67809 SEPT14P4-201ENST00000513445 186 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.34□□□□□ -1.55
YBX1P67809 FO082796.1-201ENST00000523795 183 ntBASIC5.34□□□□□ -1.55
YBX1P67809 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
YBX1P67809 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.34□□□□□ -1.55
YBX1P67809 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.34□□□□□ -1.55
YBX1P67809 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.34□□□□□ -1.55
YBX1P67809 AC104785.1-201ENST00000603220 588 ntBASIC5.34□□□□□ -1.55
YBX1P67809 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.34□□□□□ -1.55
YBX1P67809 MIR98-201ENST00000606724 119 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.34□□□□□ -1.55
YBX1P67809 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.34□□□□□ -1.55
YBX1P67809 AC005858.4-201ENST00000623191 700 ntBASIC5.34□□□□□ -1.55
YBX1P67809 AC132068.1-201ENST00000623805 459 ntBASIC5.34□□□□□ -1.55
YBX1P67809 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.34□□□□□ -1.55
YBX1P67809 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.55
YBX1P67809 AP005432.1-201ENST00000580891 3485 ntBASIC5.34□□□□□ -1.55
YBX1P67809 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
YBX1P67809 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.55
YBX1P67809 CASC19-284ENST00000642142 1868 ntBASIC5.34□□□□□ -1.55
YBX1P67809 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
YBX1P67809 OR9K1P-202ENST00000641111 3217 ntBASIC5.34□□□□□ -1.56
YBX1P67809 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
YBX1P67809 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
YBX1P67809 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.34□□□□□ -1.56
YBX1P67809 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
YBX1P67809 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
YBX1P67809 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
YBX1P67809 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
YBX1P67809 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.33□□□□□ -1.56
YBX1P67809 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
YBX1P67809 MTCO1P9-201ENST00000505577 1534 ntBASIC5.33□□□□□ -1.56
YBX1P67809 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
YBX1P67809 OR4F13P-202ENST00000560066 2054 ntBASIC5.33□□□□□ -1.56
YBX1P67809 NMD3P1-201ENST00000439704 1488 ntBASIC5.33□□□□□ -1.56
YBX1P67809 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
YBX1P67809 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
YBX1P67809 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.33□□□□□ -1.56
YBX1P67809 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.33□□□□□ -1.56
YBX1P67809 MTND4P27-201ENST00000450813 1354 ntBASIC5.33□□□□□ -1.56
YBX1P67809 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
YBX1P67809 SNRPEP3-201ENST00000338402 276 ntBASIC5.33□□□□□ -1.56
YBX1P67809 RNU6-451P-201ENST00000362921 107 ntBASIC5.33□□□□□ -1.56
YBX1P67809 Y_RNA.166-201ENST00000363730 102 ntBASIC5.33□□□□□ -1.56
YBX1P67809 RNU6-777P-201ENST00000364265 104 ntBASIC5.33□□□□□ -1.56
YBX1P67809 RNU6-115P-201ENST00000364310 107 ntBASIC5.33□□□□□ -1.56
YBX1P67809 RN7SKP124-201ENST00000364730 341 ntBASIC5.33□□□□□ -1.56
YBX1P67809 RNU6-282P-201ENST00000365357 103 ntBASIC5.33□□□□□ -1.56
YBX1P67809 MIR506-201ENST00000384998 124 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms