Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NANOGP3-201ENST00000605855 286 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 AL158211.4-201ENST00000606988 584 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 AC007038.2-201ENST00000608095 740 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 Z95327.3-201ENST00000610385 572 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 MIR6729-201ENST00000618194 65 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.15□□□□□ -1.59
GFRA1P56159 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
GFRA1P56159 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
GFRA1P56159 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
GFRA1P56159 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
GFRA1P56159 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
GFRA1P56159 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
GFRA1P56159 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
GFRA1P56159 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.15□□□□□ -1.59
GFRA1P56159 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
GFRA1P56159 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
GFRA1P56159 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
GFRA1P56159 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
GFRA1P56159 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
GFRA1P56159 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.15□□□□□ -1.59
GFRA1P56159 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA1P56159 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA1P56159 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA1P56159 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA1P56159 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA1P56159 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 AC091046.3-201ENST00000631455 1574 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 RNVU1-3-201ENST00000364313 161 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 Y_RNA.813-201ENST00000364639 102 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 Y_RNA.279-201ENST00000364763 95 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 GNG5P2-201ENST00000372054 207 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
GFRA1P56159 RNU2-15P-201ENST00000410692 191 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 UQCRBP1-201ENST00000421129 336 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 REREP1Y-201ENST00000422655 198 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 RGS17P1-201ENST00000423358 553 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 RPL12P16-201ENST00000431098 498 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA1P56159 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.14□□□□□ -1.59
GFRA1P56159 REREP2Y-201ENST00000439103 200 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.14□□□□□ -1.59
GFRA1P56159 UBDP1-202ENST00000457888 382 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 RNU6-261P-201ENST00000459506 102 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 RPS23P2-201ENST00000463671 415 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 RPS4XP10-201ENST00000465034 731 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AC022034.3-201ENST00000471393 478 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AC055855.1-201ENST00000489563 579 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 OR5H5P-201ENST00000503164 928 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.14□□□□□ -1.59
GFRA1P56159 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.14□□□□□ -1.59
GFRA1P56159 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.14□□□□□ -1.59
GFRA1P56159 RNA5SP228-201ENST00000516232 133 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.14□□□□□ -1.59
GFRA1P56159 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 AC022832.1-201ENST00000530718 645 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 GLYCAM1-201ENST00000546596 285 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.14□□□□□ -1.59
GFRA1P56159 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.14□□□□□ -1.59
GFRA1P56159 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.14□□□□□ -1.59
GFRA1P56159 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.14□□□□□ -1.59
GFRA1P56159 SNORD95-201ENST00000579879 68 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 RN7SL753P-201ENST00000581238 290 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 UBE2L4-201ENST00000587688 464 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 FO393422.1-201ENST00000603908 708 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AL035413.2-201ENST00000604801 525 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AC104695.2-201ENST00000605056 775 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 Z84480.1-201ENST00000605131 311 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AL136363.1-201ENST00000605349 337 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AC087045.1-201ENST00000605856 382 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AC128687.2-201ENST00000609657 566 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 AL158801.5-201ENST00000623123 465 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 AL359697.1-201ENST00000624879 587 ntBASIC5.14□□□□□ -1.59
GFRA1P56159 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA1P56159 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
GFRA1P56159 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA1P56159 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
GFRA1P56159 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA1P56159 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms