Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
HMGCS2P54868 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS2P54868 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HMGCS2P54868 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS2P54868 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS2P54868 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS2P54868 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS2P54868 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HMGCS2P54868 SAGE2P-201ENST00000420011 2126 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS2P54868 SNORA38.1-201ENST00000364172 131 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS2P54868 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.12□□□□□ -1.75
HMGCS2P54868 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGCS2P54868 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGCS2P54868 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGCS2P54868 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGCS2P54868 AL353898.1-201ENST00000444055 238 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 AC073587.1-201ENST00000447093 876 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGCS2P54868 BTF3P5-201ENST00000457252 467 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGCS2P54868 SUMO1P1-201ENST00000497904 306 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 AC010627.1-201ENST00000503819 1294 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGCS2P54868 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGCS2P54868 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
HMGCS2P54868 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS2P54868 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.12□□□□□ -1.75
HMGCS2P54868 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.12□□□□□ -1.75
HMGCS2P54868 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.12□□□□□ -1.75
HMGCS2P54868 ZNF92P2-201ENST00000600543 1059 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 AC098483.2-201ENST00000603158 454 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 YPEL5P2-201ENST00000605553 359 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 AC016542.1-201ENST00000608259 493 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGCS2P54868 MIR7112-201ENST00000616126 65 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 AC006213.4-201ENST00000616184 634 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HMGCS2P54868 AC119674.1-212ENST00000641155 993 ntBASIC4.12□□□□□ -1.75
HMGCS2P54868 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS2P54868 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS2P54868 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HMGCS2P54868 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGCS2P54868 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGCS2P54868 MIR634-201ENST00000385208 97 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 SNORA11.2-201ENST00000408318 127 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGCS2P54868 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGCS2P54868 UBE2V1P6-201ENST00000430840 422 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGCS2P54868 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGCS2P54868 AL513321.1-201ENST00000441175 761 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGCS2P54868 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGCS2P54868 IFNWP4-201ENST00000453148 294 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 AC015908.1-201ENST00000478739 476 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 OR9N1P-202ENST00000494289 481 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 AC010468.3-201ENST00000508225 458 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGCS2P54868 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.11□□□□□ -1.75
HMGCS2P54868 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGCS2P54868 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HMGCS2P54868 AL513477.2-201ENST00000607858 568 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 MIR8057-201ENST00000620957 69 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 AC091905.1-201ENST00000624400 311 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGCS2P54868 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HMGCS2P54868 AC097504.1-201ENST00000515103 2415 ntBASIC4.11□□□□□ -1.75
HMGCS2P54868 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HMGCS2P54868 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGCS2P54868 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGCS2P54868 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.1□□□□□ -1.75
HMGCS2P54868 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGCS2P54868 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGCS2P54868 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HMGCS2P54868 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGCS2P54868 FRG1CP-201ENST00000358464 769 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 RNU6-31P-201ENST00000384388 108 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 MIR92A2-201ENST00000385299 75 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 MIR320B1-201ENST00000390209 79 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.1□□□□□ -1.75
HMGCS2P54868 AC096664.2-201ENST00000411843 406 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 CYCSP10-201ENST00000417973 294 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGCS2P54868 EIF4EP1-201ENST00000422311 642 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 SDCBPP2-201ENST00000424643 885 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGCS2P54868 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGCS2P54868 SNORA59A-201ENST00000459326 152 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGCS2P54868 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGCS2P54868 RPL23AP73-201ENST00000492507 471 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 AC093663.1-201ENST00000497190 394 ntBASIC4.1□□□□□ -1.75
HMGCS2P54868 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGCS2P54868 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGCS2P54868 AC112206.4-201ENST00000515142 405 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms