Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 BNIP3P39-201ENST00000601077 554 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AL161729.3-201ENST00000603533 673 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC020634.1-201ENST00000608701 549 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC084757.4-201ENST00000616350 526 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIMK1P53667 RMST_9.1-201ENST00000619945 193 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC055839.1-201ENST00000634467 498 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 BX649567.1-201ENST00000642071 1134 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIMK1P53667 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LIMK1P53667 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIMK1P53667 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.31□□□□□ -1.72
LIMK1P53667 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.31□□□□□ -1.72
LIMK1P53667 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LIMK1P53667 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.31□□□□□ -1.72
LIMK1P53667 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
LIMK1P53667 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIMK1P53667 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LIMK1P53667 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
LIMK1P53667 AC025263.3-201ENST00000622965 1396 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.3□□□□□ -1.72
LIMK1P53667 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
LIMK1P53667 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.3□□□□□ -1.72
LIMK1P53667 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIMK1P53667 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LIMK1P53667 RNA5SP130-201ENST00000364431 114 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK1P53667 PRRC2CP1-201ENST00000404428 159 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 BTF3P8-201ENST00000414577 526 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 LIPT1P1-201ENST00000415870 1186 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 TCEA1P2-201ENST00000420496 906 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.3□□□□□ -1.72
LIMK1P53667 PSMA2P3-201ENST00000429685 675 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.3□□□□□ -1.72
LIMK1P53667 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.3□□□□□ -1.72
LIMK1P53667 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.3□□□□□ -1.72
LIMK1P53667 AC104689.1-201ENST00000473356 768 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.3□□□□□ -1.72
LIMK1P53667 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LIMK1P53667 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK1P53667 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LIMK1P53667 FTH1P21-201ENST00000512179 511 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 RNU6-416P-201ENST00000516265 103 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 RNA5SP49-201ENST00000516450 115 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 SOD1P3-201ENST00000518682 454 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 AC090151.1-201ENST00000520784 730 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.3□□□□□ -1.72
LIMK1P53667 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK1P53667 AC118942.1-201ENST00000529674 1035 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 AP004242.1-201ENST00000533701 349 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.3□□□□□ -1.72
LIMK1P53667 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK1P53667 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK1P53667 BPTFP1-201ENST00000579209 492 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.3□□□□□ -1.72
LIMK1P53667 AC007179.3-201ENST00000604976 235 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 AL121652.1-201ENST00000608851 448 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.3□□□□□ -1.72
LIMK1P53667 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK1P53667 AC005858.4-201ENST00000623191 700 ntBASIC4.3□□□□□ -1.72
LIMK1P53667 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LIMK1P53667 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK1P53667 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK1P53667 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIMK1P53667 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
LIMK1P53667 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LIMK1P53667 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIMK1P53667 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.3□□□□□ -1.72
LIMK1P53667 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIMK1P53667 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIMK1P53667 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIMK1P53667 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.29□□□□□ -1.72
LIMK1P53667 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
LIMK1P53667 AL391684.1-202ENST00000641293 1636 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK1P53667 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK1P53667 RNA5SP151-201ENST00000365632 117 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.29□□□□□ -1.72
LIMK1P53667 RPS3AP25-201ENST00000411660 793 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 RAC1P3-201ENST00000416129 580 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AL009174.1-201ENST00000426577 416 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AL445584.1-201ENST00000431451 330 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK1P53667 AL138799.3-201ENST00000438968 350 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 RPL23AP52-201ENST00000439311 478 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK1P53667 HMGN2P21-201ENST00000447764 270 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AL500522.2-201ENST00000448562 343 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.29□□□□□ -1.72
LIMK1P53667 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.29□□□□□ -1.72
LIMK1P53667 AC026414.1-201ENST00000504046 698 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK1P53667 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.29□□□□□ -1.72
LIMK1P53667 AC008837.1-201ENST00000511513 412 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 RNU6-276P-201ENST00000516114 96 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 RNU2-58P-201ENST00000516403 183 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 SNORA74D-201ENST00000516404 141 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 RNA5SP73-201ENST00000516744 108 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.29□□□□□ -1.72
LIMK1P53667 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms