Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX3P41225 AL357520.1-201ENST00000441557 453 ntBASIC3.85□□□□□ -1.79
SOX3P41225 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.85□□□□□ -1.79
SOX3P41225 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX3P41225 MRPL42P4-201ENST00000453267 443 ntBASIC3.85□□□□□ -1.79
SOX3P41225 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX3P41225 PTGES3P5-201ENST00000455109 434 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AL133477.1-201ENST00000457472 514 ntBASIC3.85□□□□□ -1.79
SOX3P41225 RNA5SP246-201ENST00000458909 119 ntBASIC3.85□□□□□ -1.79
SOX3P41225 RPL23AP2-201ENST00000471227 466 ntBASIC3.85□□□□□ -1.79
SOX3P41225 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SOX3P41225 AC069528.1-202ENST00000482888 637 ntBASIC3.85□□□□□ -1.79
SOX3P41225 RPS27P23-201ENST00000487608 251 ntBASIC3.85□□□□□ -1.79
SOX3P41225 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX3P41225 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.85□□□□□ -1.79
SOX3P41225 AC118282.1-201ENST00000506408 765 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AC008885.2-201ENST00000509506 930 ntBASIC3.85□□□□□ -1.79
SOX3P41225 RNU6-311P-201ENST00000516224 102 ntBASIC3.85□□□□□ -1.79
SOX3P41225 MIR2116-201ENST00000517221 80 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.85□□□□□ -1.79
SOX3P41225 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX3P41225 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX3P41225 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX3P41225 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX3P41225 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX3P41225 AC004217.3-201ENST00000551552 878 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.85□□□□□ -1.79
SOX3P41225 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.85□□□□□ -1.79
SOX3P41225 AC044913.1-201ENST00000557200 430 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX3P41225 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX3P41225 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.85□□□□□ -1.79
SOX3P41225 AC110743.1-201ENST00000584870 478 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX3P41225 PCNAP1-202ENST00000595299 752 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AC067959.1-201ENST00000604334 379 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AC010857.1-201ENST00000606398 594 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AP004247.3-201ENST00000608682 624 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AC064801.1-201ENST00000612025 407 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AL592148.2-201ENST00000612210 372 ntBASIC3.85□□□□□ -1.79
SOX3P41225 AP000770.2-201ENST00000623694 100 ntBASIC3.85□□□□□ -1.79
SOX3P41225 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.85□□□□□ -1.79
SOX3P41225 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.85□□□□□ -1.79
SOX3P41225 AC009452.1-201ENST00000640823 606 ntBASIC3.85□□□□□ -1.79
SOX3P41225 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SOX3P41225 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX3P41225 Z82217.1-201ENST00000625157 8149 ntBASIC3.85□□□□□ -1.79
SOX3P41225 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SOX3P41225 AC099786.3-201ENST00000565735 1410 ntBASIC3.85□□□□□ -1.79
SOX3P41225 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SOX3P41225 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX3P41225 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX3P41225 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.85□□□□□ -1.79
SOX3P41225 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX3P41225 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
SOX3P41225 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SOX3P41225 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SOX3P41225 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SOX3P41225 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SOX3P41225 AC093535.2-201ENST00000624769 2326 ntBASIC3.84□□□□□ -1.79
SOX3P41225 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX3P41225 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SOX3P41225 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX3P41225 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX3P41225 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SOX3P41225 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX3P41225 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX3P41225 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SOX3P41225 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX3P41225 SPRR2C-201ENST00000290702 219 ntBASIC3.84□□□□□ -1.79
SOX3P41225 RNU4-68P-201ENST00000364314 141 ntBASIC3.84□□□□□ -1.79
SOX3P41225 RNA5SP130-201ENST00000364431 114 ntBASIC3.84□□□□□ -1.79
SOX3P41225 RNU6-619P-201ENST00000365146 108 ntBASIC3.84□□□□□ -1.79
SOX3P41225 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX3P41225 RNU11-4P-201ENST00000391149 133 ntBASIC3.84□□□□□ -1.79
SOX3P41225 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX3P41225 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SOX3P41225 AL356967.1-201ENST00000406305 431 ntBASIC3.84□□□□□ -1.79
SOX3P41225 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX3P41225 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX3P41225 AL513175.2-201ENST00000422071 443 ntBASIC3.84□□□□□ -1.79
SOX3P41225 RPF2P1-201ENST00000424137 906 ntBASIC3.84□□□□□ -1.79
SOX3P41225 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX3P41225 RAC1P8-201ENST00000427086 527 ntBASIC3.84□□□□□ -1.79
SOX3P41225 HMGB3P5-201ENST00000428894 612 ntBASIC3.84□□□□□ -1.79
SOX3P41225 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX3P41225 NANOGP2-201ENST00000435391 727 ntBASIC3.84□□□□□ -1.79
SOX3P41225 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX3P41225 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX3P41225 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX3P41225 AL121877.1-201ENST00000453704 622 ntBASIC3.84□□□□□ -1.79
SOX3P41225 GAPDHP39-201ENST00000481866 979 ntBASIC3.84□□□□□ -1.79
SOX3P41225 MTCO3P35-201ENST00000485582 781 ntBASIC3.84□□□□□ -1.79
SOX3P41225 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX3P41225 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX3P41225 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.84□□□□□ -1.79
SOX3P41225 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX3P41225 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX3P41225 VWA8P1-201ENST00000510889 176 ntBASIC3.84□□□□□ -1.79
SOX3P41225 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms