Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.63□□□□□ -1.51
CCNFP41002 RN7SL570P-201ENST00000484405 292 ntBASIC5.63□□□□□ -1.51
CCNFP41002 RPL30P11-201ENST00000495304 339 ntBASIC5.63□□□□□ -1.51
CCNFP41002 AC090453.1-201ENST00000495560 436 ntBASIC5.63□□□□□ -1.51
CCNFP41002 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.63□□□□□ -1.51
CCNFP41002 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNFP41002 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNFP41002 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNFP41002 SNORA70.20-201ENST00000516848 126 ntBASIC5.63□□□□□ -1.51
CCNFP41002 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCNFP41002 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.63□□□□□ -1.51
CCNFP41002 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.63□□□□□ -1.51
CCNFP41002 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNFP41002 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNFP41002 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.63□□□□□ -1.51
CCNFP41002 AC009117.1-201ENST00000563948 554 ntBASIC5.63□□□□□ -1.51
CCNFP41002 AC099489.2-201ENST00000574976 260 ntBASIC5.63□□□□□ -1.51
CCNFP41002 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNFP41002 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNFP41002 AC007038.2-201ENST00000608095 740 ntBASIC5.63□□□□□ -1.51
CCNFP41002 AC093788.1-201ENST00000609356 927 ntBASIC5.63□□□□□ -1.51
CCNFP41002 OR10AB1P-201ENST00000609613 938 ntBASIC5.63□□□□□ -1.51
CCNFP41002 AC006065.6-201ENST00000625201 545 ntBASIC5.63□□□□□ -1.51
CCNFP41002 PHKBP1-201ENST00000450951 1951 ntBASIC5.63□□□□□ -1.51
CCNFP41002 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNFP41002 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNFP41002 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNFP41002 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCNFP41002 PANDAR-201ENST00000629595 1506 ntBASIC5.63□□□□□ -1.51
CCNFP41002 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNFP41002 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCNFP41002 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CCNFP41002 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCNFP41002 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.62□□□□□ -1.51
CCNFP41002 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCNFP41002 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCNFP41002 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCNFP41002 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCNFP41002 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCNFP41002 MIR375-201ENST00000362103 64 ntBASIC5.62□□□□□ -1.51
CCNFP41002 Y_RNA.381-201ENST00000365666 102 ntBASIC5.62□□□□□ -1.51
CCNFP41002 RNU4-2-201ENST00000365668 141 ntBASIC5.62□□□□□ -1.51
CCNFP41002 SNORA51.6-201ENST00000384151 125 ntBASIC5.62□□□□□ -1.51
CCNFP41002 RPL7P25-201ENST00000404151 721 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.62□□□□□ -1.51
CCNFP41002 AL513185.2-201ENST00000425543 193 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.62□□□□□ -1.51
CCNFP41002 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.62□□□□□ -1.51
CCNFP41002 RPL23AP20-201ENST00000447965 421 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.62□□□□□ -1.51
CCNFP41002 AZGP1P2-201ENST00000454506 345 ntBASIC5.62□□□□□ -1.51
CCNFP41002 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.62□□□□□ -1.51
CCNFP41002 NXT1P1-201ENST00000458481 316 ntBASIC5.62□□□□□ -1.51
CCNFP41002 UBFD1P1-201ENST00000473259 814 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.62□□□□□ -1.51
CCNFP41002 AC022215.1-201ENST00000481770 362 ntBASIC5.62□□□□□ -1.51
CCNFP41002 EIF3LP3-201ENST00000495197 822 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AC114967.1-201ENST00000504890 259 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.62□□□□□ -1.51
CCNFP41002 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 AC091912.1-201ENST00000511351 248 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 Vault.3-201ENST00000516676 95 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.62□□□□□ -1.51
CCNFP41002 IGLV3-30-201ENST00000524362 298 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.62□□□□□ -1.51
CCNFP41002 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCNFP41002 ANP32BP3-201ENST00000559213 706 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.62□□□□□ -1.51
CCNFP41002 AC110743.1-201ENST00000584870 478 ntBASIC5.62□□□□□ -1.51
CCNFP41002 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 AL162413.1-201ENST00000603198 110 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AC011468.4-201ENST00000603942 409 ntBASIC5.62□□□□□ -1.51
CCNFP41002 Z95327.3-201ENST00000610385 572 ntBASIC5.62□□□□□ -1.51
CCNFP41002 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.62□□□□□ -1.51
CCNFP41002 AC090607.5-201ENST00000615692 224 ntBASIC5.62□□□□□ -1.51
CCNFP41002 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 RPS4XP5-202ENST00000449995 1334 ntBASIC5.62□□□□□ -1.51
CCNFP41002 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCNFP41002 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCNFP41002 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 AL049780.3-201ENST00000624612 1583 ntBASIC5.62□□□□□ -1.51
CCNFP41002 MTND5P17-201ENST00000418405 1603 ntBASIC5.62□□□□□ -1.51
CCNFP41002 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCNFP41002 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCNFP41002 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCNFP41002 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CCNFP41002 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCNFP41002 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCNFP41002 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNFP41002 AC068870.1-201ENST00000563737 2455 ntBASIC5.62□□□□□ -1.51
CCNFP41002 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.61□□□□□ -1.51
CCNFP41002 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms