Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.75□□□□□ -1.81
COL4A5P29400 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.75□□□□□ -1.81
COL4A5P29400 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
COL4A5P29400 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A5P29400 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.74□□□□□ -1.81
COL4A5P29400 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
COL4A5P29400 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A5P29400 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A5P29400 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC3.74□□□□□ -1.81
COL4A5P29400 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.74□□□□□ -1.81
COL4A5P29400 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.74□□□□□ -1.81
COL4A5P29400 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.74□□□□□ -1.81
COL4A5P29400 HMGB1P3-201ENST00000502802 616 ntBASIC3.74□□□□□ -1.81
COL4A5P29400 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.74□□□□□ -1.81
COL4A5P29400 Y_RNA.673-201ENST00000516306 88 ntBASIC3.74□□□□□ -1.81
COL4A5P29400 RNA5SP367-201ENST00000516557 118 ntBASIC3.74□□□□□ -1.81
COL4A5P29400 COX6B1P6-201ENST00000522347 255 ntBASIC3.74□□□□□ -1.81
COL4A5P29400 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A5P29400 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.74□□□□□ -1.81
COL4A5P29400 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.74□□□□□ -1.81
COL4A5P29400 uc_338.1-201ENST00000612113 180 ntBASIC3.74□□□□□ -1.81
COL4A5P29400 AC138393.1-206ENST00000540997 1886 ntBASIC3.74□□□□□ -1.81
COL4A5P29400 AL031595.2-201ENST00000624215 19071 ntBASIC3.74□□□□□ -1.81
COL4A5P29400 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A5P29400 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.74□□□□□ -1.81
COL4A5P29400 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
COL4A5P29400 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A5P29400 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
COL4A5P29400 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A5P29400 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A5P29400 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
COL4A5P29400 AP003122.5-201ENST00000527668 3766 ntBASIC3.73□□□□□ -1.81
COL4A5P29400 MIR1261-201ENST00000408659 82 ntBASIC3.73□□□□□ -1.81
COL4A5P29400 RNA5SP104-201ENST00000410989 118 ntBASIC3.73□□□□□ -1.81
COL4A5P29400 RNA5SP184-201ENST00000411071 108 ntBASIC3.73□□□□□ -1.81
COL4A5P29400 AL592148.1-201ENST00000413568 445 ntBASIC3.73□□□□□ -1.81
COL4A5P29400 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A5P29400 BX276092.4-201ENST00000452056 248 ntBASIC3.73□□□□□ -1.81
COL4A5P29400 RPS4XP13-201ENST00000483219 789 ntBASIC3.73□□□□□ -1.81
COL4A5P29400 AC103783.1-201ENST00000520506 373 ntBASIC3.73□□□□□ -1.81
COL4A5P29400 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A5P29400 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.73□□□□□ -1.81
COL4A5P29400 AL359535.1-201ENST00000612100 1087 ntBASIC3.73□□□□□ -1.81
COL4A5P29400 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
COL4A5P29400 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COL4A5P29400 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A5P29400 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
COL4A5P29400 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COL4A5P29400 MTND5P12-201ENST00000502851 1449 ntBASIC3.73□□□□□ -1.81
COL4A5P29400 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.72□□□□□ -1.81
COL4A5P29400 AL365361.1-201ENST00000566942 3481 ntBASIC3.72□□□□□ -1.81
COL4A5P29400 RPS4XP8-201ENST00000402039 771 ntBASIC3.72□□□□□ -1.81
COL4A5P29400 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL4A5P29400 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.72□□□□□ -1.81
COL4A5P29400 AC010306.1-201ENST00000523223 1117 ntBASIC3.72□□□□□ -1.81
COL4A5P29400 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.72□□□□□ -1.81
COL4A5P29400 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.72□□□□□ -1.81
COL4A5P29400 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.72□□□□□ -1.81
COL4A5P29400 AL360157.1-201ENST00000565962 87 ntBASIC3.72□□□□□ -1.81
COL4A5P29400 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.72□□□□□ -1.81
COL4A5P29400 OOSP1P2-201ENST00000579644 351 ntBASIC3.72□□□□□ -1.81
COL4A5P29400 AC067852.4-201ENST00000590314 478 ntBASIC3.72□□□□□ -1.81
COL4A5P29400 LSM1P2-201ENST00000604911 322 ntBASIC3.72□□□□□ -1.81
COL4A5P29400 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL4A5P29400 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.72□□□□□ -1.81
COL4A5P29400 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL4A5P29400 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
COL4A5P29400 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL4A5P29400 AL353692.2-201ENST00000407054 335 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 MTND2P11-201ENST00000423638 648 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.71□□□□□ -1.81
COL4A5P29400 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 RPS24P13-201ENST00000442520 397 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 RPL23AP67-201ENST00000465341 474 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
COL4A5P29400 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.71□□□□□ -1.81
COL4A5P29400 MIR2276-201ENST00000516886 89 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.71□□□□□ -1.81
COL4A5P29400 AL139174.1-201ENST00000531489 886 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.71□□□□□ -1.81
COL4A5P29400 MIR4738-201ENST00000579134 87 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 AC023389.2-201ENST00000580031 955 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.71□□□□□ -1.81
COL4A5P29400 uc_338.32-201ENST00000615087 172 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 AC079298.2-201ENST00000623885 459 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.71□□□□□ -1.81
COL4A5P29400 IGHVIII-44-202ENST00000636235 289 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 AC139713.2-210ENST00000641741 992 ntBASIC3.71□□□□□ -1.81
COL4A5P29400 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
COL4A5P29400 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
COL4A5P29400 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.71□□□□□ -1.82
COL4A5P29400 MIR22-201ENST00000362190 85 ntBASIC3.71□□□□□ -1.82
COL4A5P29400 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.71□□□□□ -1.82
COL4A5P29400 AC021205.2-201ENST00000480069 347 ntBASIC3.71□□□□□ -1.82
COL4A5P29400 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.71□□□□□ -1.82
COL4A5P29400 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.71□□□□□ -1.82
COL4A5P29400 COX6CP8-201ENST00000522620 226 ntBASIC3.71□□□□□ -1.82
COL4A5P29400 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.71□□□□□ -1.82
COL4A5P29400 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.71□□□□□ -1.82
COL4A5P29400 AL512310.1-201ENST00000548639 172 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms