Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MTCO1P35-201ENST00000515270 228 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 OR4R3P-201ENST00000525084 838 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.82□□□□□ -1.8
PTPN6P29350 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN6P29350 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN6P29350 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN6P29350 AC107016.1-201ENST00000550463 337 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AC007224.1-201ENST00000564410 144 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN6P29350 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
PTPN6P29350 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN6P29350 AL591034.3-201ENST00000605511 685 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AC120053.1-201ENST00000607706 736 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN6P29350 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN6P29350 AC103858.2-201ENST00000621471 543 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AL359715.5-201ENST00000623431 443 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AC090506.2-201ENST00000624521 419 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AC106730.3-201ENST00000624568 641 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN6P29350 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN6P29350 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN6P29350 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PTPN6P29350 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN6P29350 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN6P29350 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PTPN6P29350 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
PTPN6P29350 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN6P29350 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN6P29350 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN6P29350 UBE3AP2-201ENST00000429033 2259 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN6P29350 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PTPN6P29350 RNA5SP322-201ENST00000363617 119 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 OR6K3-202ENST00000368146 996 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 SNORD65C-201ENST00000390962 71 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 AL355379.1-201ENST00000405542 640 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 RN7SKP33-201ENST00000410942 340 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN6P29350 PTP4A1P5-201ENST00000420305 455 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN6P29350 AC246680.2-201ENST00000422106 389 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN6P29350 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN6P29350 USP12PY-201ENST00000427677 1064 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 UBE2V1P1-201ENST00000430836 445 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 KCTD9P3-201ENST00000434597 1169 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN6P29350 AL929288.2-201ENST00000446368 407 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 GXYLT1P1-201ENST00000446657 490 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN6P29350 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN6P29350 RPS7P7-201ENST00000463499 571 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN6P29350 AP001086.1-201ENST00000494882 321 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN6P29350 BTF3L4P4-201ENST00000506381 449 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 TMEM248P1-201ENST00000510579 951 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 NDUFB4P9-201ENST00000511646 388 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN6P29350 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN6P29350 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN6P29350 CR383656.14-201ENST00000551951 406 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN6P29350 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN6P29350 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN6P29350 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN6P29350 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PTPN6P29350 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PTPN6P29350 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PTPN6P29350 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
PTPN6P29350 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN6P29350 EXOC5P1-201ENST00000510543 1969 ntBASIC3.81□□□□□ -1.8
PTPN6P29350 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN6P29350 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN6P29350 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN6P29350 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN6P29350 AC066616.2-201ENST00000559334 1481 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN6P29350 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PTPN6P29350 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN6P29350 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN6P29350 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN6P29350 SNORA31-201ENST00000362607 130 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 RNU6-354P-201ENST00000383862 107 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 RNU6-610P-201ENST00000384264 107 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 RNU1-89P-201ENST00000384592 164 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 SNORA57.1-201ENST00000391227 145 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 ENSAP1-201ENST00000392855 326 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PTPN6P29350 ZNF603P-201ENST00000405613 487 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 RNA5SP317-201ENST00000410176 116 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 RNU6-77P-201ENST00000410554 91 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 RNA5SP311-201ENST00000411290 116 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 AC069218.2-201ENST00000411665 344 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN6P29350 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN6P29350 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN6P29350 EI24P1-201ENST00000416584 867 ntBASIC3.8□□□□□ -1.8
PTPN6P29350 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms