Protein–RNA interactions for Protein: P23467

PTPRB, Receptor-type tyrosine-protein phosphatase beta, humanhuman

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRBP23467 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPRBP23467 AC106872.2-201ENST00000494303 480 ntBASIC3.19□□□□□ -1.9
PTPRBP23467 AC112198.1-201ENST00000505369 1220 ntBASIC3.19□□□□□ -1.9
PTPRBP23467 BTF3L4P4-201ENST00000506381 449 ntBASIC3.19□□□□□ -1.9
PTPRBP23467 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPRBP23467 PSMA2P1-201ENST00000526365 646 ntBASIC3.19□□□□□ -1.9
PTPRBP23467 AC087888.1-201ENST00000550884 1254 ntBASIC3.19□□□□□ -1.9
PTPRBP23467 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPRBP23467 Z82195.1-201ENST00000604558 398 ntBASIC3.19□□□□□ -1.9
PTPRBP23467 AL135786.2-201ENST00000608422 615 ntBASIC3.19□□□□□ -1.9
PTPRBP23467 AC007998.5-201ENST00000622938 237 ntBASIC3.19□□□□□ -1.9
PTPRBP23467 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPRBP23467 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPRBP23467 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.19□□□□□ -1.9
PTPRBP23467 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PTPRBP23467 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPRBP23467 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
PTPRBP23467 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPRBP23467 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRBP23467 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRBP23467 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PTPRBP23467 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPRBP23467 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
PTPRBP23467 RNA5SP126-201ENST00000365092 109 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRBP23467 AL031679.1-201ENST00000400616 525 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPRBP23467 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRBP23467 RPL23AP82-202ENST00000427528 469 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AL139132.1-201ENST00000431587 344 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AC096638.2-201ENST00000434965 711 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AC005002.1-201ENST00000447458 540 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRBP23467 AL133477.1-201ENST00000457472 514 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 CENPBD1P1-201ENST00000464061 469 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPRBP23467 RPS3AP50-201ENST00000487064 803 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 VN1R104P-201ENST00000505115 1009 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AC093311.1-201ENST00000506586 2021 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
PTPRBP23467 RN7SKP209-201ENST00000516888 304 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRBP23467 GTF3AP2-201ENST00000557014 266 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AC078899.5-201ENST00000612475 178 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AC103858.2-201ENST00000621471 543 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
PTPRBP23467 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
PTPRBP23467 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRBP23467 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPRBP23467 NDUFB1P1-201ENST00000435191 180 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AC006028.1-201ENST00000438379 402 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AL357520.1-201ENST00000441557 453 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 DNAJC19P8-201ENST00000452887 259 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AP002371.1-201ENST00000463604 433 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AC084357.1-201ENST00000473404 255 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPRBP23467 RN7SKP132-201ENST00000516001 208 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPRBP23467 AC104984.5-201ENST00000586878 94 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPRBP23467 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPRBP23467 AL161912.3-201ENST00000605404 628 ntBASIC3.18□□□□□ -1.9
PTPRBP23467 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPRBP23467 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRBP23467 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPRBP23467 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRBP23467 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRBP23467 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRBP23467 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPRBP23467 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
PTPRBP23467 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRBP23467 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRBP23467 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRBP23467 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRBP23467 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTPRBP23467 RNU1-70P-201ENST00000362618 164 ntBASIC3.17□□□□□ -1.9
PTPRBP23467 RNU6-984P-201ENST00000363236 109 ntBASIC3.17□□□□□ -1.9
PTPRBP23467 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTPRBP23467 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPRBP23467 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPRBP23467 AL353705.1-201ENST00000433468 480 ntBASIC3.17□□□□□ -1.9
PTPRBP23467 SETP5-201ENST00000437270 562 ntBASIC3.17□□□□□ -1.9
PTPRBP23467 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPRBP23467 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPRBP23467 RN7SL93P-201ENST00000463035 293 ntBASIC3.17□□□□□ -1.9
PTPRBP23467 AC068724.1-201ENST00000487100 792 ntBASIC3.17□□□□□ -1.9
PTPRBP23467 APOOP4-201ENST00000513530 597 ntBASIC3.17□□□□□ -1.9
PTPRBP23467 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPRBP23467 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.17□□□□□ -1.9
PTPRBP23467 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.17□□□□□ -1.9
PTPRBP23467 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPRBP23467 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPRBP23467 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPRBP23467 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPRBP23467 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRBP23467 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRBP23467 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPRBP23467 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTPRBP23467 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms