Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.63□□□□□ -1.67
HOXC6P09630 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXC6P09630 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 OR5BE1P-201ENST00000425977 939 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 NPM1P34-201ENST00000428821 893 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 ETF1P3-201ENST00000430422 1160 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AL035458.1-201ENST00000433096 585 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 RPL23AP83-201ENST00000434984 473 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 TBCAP1-201ENST00000436520 327 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXC6P09630 ARL4AP3-201ENST00000441452 574 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 FGF7P5-201ENST00000441829 291 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXC6P09630 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.63□□□□□ -1.67
HOXC6P09630 SEPT14P24-201ENST00000447236 180 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 PTMAP3-201ENST00000447474 330 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.63□□□□□ -1.67
HOXC6P09630 RN7SL271P-201ENST00000487601 295 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 CDH12P2-201ENST00000504393 298 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AC091435.1-201ENST00000505442 584 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 IGKV2-23-201ENST00000518729 323 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AC026403.1-201ENST00000518938 295 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXC6P09630 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.63□□□□□ -1.67
HOXC6P09630 AP000926.4-201ENST00000527351 454 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXC6P09630 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXC6P09630 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXC6P09630 MTCYBP33-201ENST00000575007 1130 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXC6P09630 AC110743.1-201ENST00000584870 478 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXC6P09630 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 AP002906.1-201ENST00000603405 233 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AL138721.1-201ENST00000616756 179 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AP004607.9-201ENST00000618202 316 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AC073569.3-201ENST00000619055 682 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AL158163.2-201ENST00000619110 700 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AC131159.1-201ENST00000621854 213 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 OR5BE1P-202ENST00000641168 1176 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.63□□□□□ -1.67
HOXC6P09630 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 AC104454.1-201ENST00000421341 1401 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HOXC6P09630 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC6P09630 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC6P09630 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC6P09630 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC6P09630 MAPK10-349ENST00000641767 3661 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC6P09630 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXC6P09630 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.62□□□□□ -1.67
HOXC6P09630 RNU4-92P-201ENST00000363783 136 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 SNORA57.3-201ENST00000411095 141 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 RPS7P9-201ENST00000414704 586 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 PTP4A1P5-201ENST00000420305 455 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 USP9YP26-201ENST00000421008 661 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC6P09630 FO393419.3-201ENST00000428741 282 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 AL365396.1-201ENST00000430854 671 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC6P09630 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC6P09630 RPS4XP4-201ENST00000443195 763 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 HMGB3P6-201ENST00000444896 598 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.62□□□□□ -1.67
HOXC6P09630 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXC6P09630 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC6P09630 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXC6P09630 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC6P09630 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC6P09630 AC023050.1-201ENST00000498198 304 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 AC034244.1-201ENST00000507687 207 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC6P09630 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC6P09630 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.62□□□□□ -1.67
HOXC6P09630 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC6P09630 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXC6P09630 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC6P09630 AC109446.2-201ENST00000567872 497 ntBASIC4.62□□□□□ -1.67
HOXC6P09630 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXC6P09630 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.62□□□□□ -1.67
HOXC6P09630 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms