Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PDGFAP04085 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PDGFAP04085 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFAP04085 RNU2-39P-201ENST00000410604 198 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 METTL15P3-201ENST00000415522 1221 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFAP04085 OR2AS1P-201ENST00000427827 319 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFAP04085 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.88□□□□□ -1.47
PDGFAP04085 AC239809.1-201ENST00000450470 217 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFAP04085 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.88□□□□□ -1.47
PDGFAP04085 RNU7-59P-201ENST00000459101 61 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AC027575.1-201ENST00000481064 460 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 PPIAP19-201ENST00000486414 492 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AC068305.1-201ENST00000497406 726 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 SNORD46.2-201ENST00000516021 102 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 RN7SKP238-201ENST00000516483 249 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 RNA5SP503-201ENST00000517047 117 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFAP04085 HMGB1P41-201ENST00000520234 440 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFAP04085 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.88□□□□□ -1.47
PDGFAP04085 AC103843.2-201ENST00000530523 682 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFAP04085 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.88□□□□□ -1.47
PDGFAP04085 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PDGFAP04085 MTCYBP13-201ENST00000578634 1093 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFAP04085 POLR3GP2-201ENST00000588366 668 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.88□□□□□ -1.47
PDGFAP04085 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.88□□□□□ -1.47
PDGFAP04085 SNRPGP17-201ENST00000603780 214 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AC116447.1-201ENST00000613153 453 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AL512624.1-201ENST00000613638 469 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AL590099.1-201ENST00000615276 138 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 uc_338.11-201ENST00000619132 160 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFAP04085 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PDGFAP04085 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFAP04085 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFAP04085 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFAP04085 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFAP04085 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFAP04085 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFAP04085 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFAP04085 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFAP04085 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.88□□□□□ -1.47
PDGFAP04085 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 AC092070.2-203ENST00000598377 3644 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.87□□□□□ -1.47
PDGFAP04085 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PDGFAP04085 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 RNU6-522P-201ENST00000364497 107 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 VN1R36P-201ENST00000414936 291 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.87□□□□□ -1.47
PDGFAP04085 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.87□□□□□ -1.47
PDGFAP04085 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.87□□□□□ -1.47
PDGFAP04085 MTND6P12-201ENST00000428247 522 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 EZH2P1-201ENST00000431167 291 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 GPM6BP2-201ENST00000432046 144 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 RPL12P17-201ENST00000432393 498 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 FTLP19-201ENST00000433300 394 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.87□□□□□ -1.47
PDGFAP04085 AL353662.1-201ENST00000439099 327 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 AC127537.2-201ENST00000439258 465 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 Z80107.2-201ENST00000445127 392 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 GPM6BP1-201ENST00000446387 144 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.87□□□□□ -1.47
PDGFAP04085 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.87□□□□□ -1.47
PDGFAP04085 MEMO1P4-201ENST00000453590 386 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 CBX1P2-201ENST00000453841 458 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 FGF7P3-201ENST00000454645 303 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.87□□□□□ -1.47
PDGFAP04085 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PDGFAP04085 AC098847.1-201ENST00000473094 348 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 RN7SL369P-201ENST00000477138 299 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.87□□□□□ -1.47
PDGFAP04085 RN7SL284P-201ENST00000498823 275 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 COX7A2P2-201ENST00000505291 250 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 AC092436.1-201ENST00000506450 503 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 RNA5SP92-201ENST00000516437 110 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.87□□□□□ -1.47
PDGFAP04085 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.87□□□□□ -1.47
PDGFAP04085 AC025588.3-201ENST00000604182 274 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 AC080078.3-201ENST00000605407 463 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.87□□□□□ -1.47
PDGFAP04085 AC084781.2-201ENST00000615568 161 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 AC015908.5-201ENST00000623289 343 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 AP002370.1-201ENST00000528055 1602 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PDGFAP04085 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PDGFAP04085 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms