Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA1P02708 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA1P02708 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CHRNA1P02708 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA1P02708 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA1P02708 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA1P02708 METTL21EP-201ENST00000298105 713 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA1P02708 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA1P02708 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA1P02708 MIR218-2-201ENST00000385006 110 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CHRNA1P02708 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA1P02708 LINC01347-201ENST00000417964 355 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA1P02708 AC114814.2-201ENST00000419195 485 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 MTND2P11-201ENST00000423638 648 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA1P02708 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA1P02708 RPL7P4-203ENST00000430239 730 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA1P02708 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA1P02708 MTCO3P43-201ENST00000440974 771 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA1P02708 RPL21P23-201ENST00000446654 460 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA1P02708 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA1P02708 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.1□□□□□ -1.75
CHRNA1P02708 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.1□□□□□ -1.75
CHRNA1P02708 RPL37P3-201ENST00000456825 293 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA1P02708 AC023050.1-201ENST00000498198 304 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
CHRNA1P02708 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.1□□□□□ -1.75
CHRNA1P02708 RNA5SP208-201ENST00000516156 78 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA1P02708 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA1P02708 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA1P02708 AC093014.1-201ENST00000548926 724 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA1P02708 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA1P02708 AC004775.1-201ENST00000607389 753 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 MIR1264-201ENST00000616374 69 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 AP003072.4-201ENST00000624580 310 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 AC244258.1-201ENST00000637553 1071 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 AL392088.2-201ENST00000637607 285 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 AC018555.1-201ENST00000567548 1980 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA1P02708 MTND4P21-201ENST00000453886 1357 ntBASIC4.1□□□□□ -1.75
CHRNA1P02708 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CHRNA1P02708 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
CHRNA1P02708 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA1P02708 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA1P02708 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA1P02708 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA1P02708 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CHRNA1P02708 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.09□□□□□ -1.75
CHRNA1P02708 RNA5SP72-201ENST00000364442 117 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CHRNA1P02708 RNVU1-14-201ENST00000384770 164 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 AL353692.2-201ENST00000407054 335 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 UBE2V1P15-201ENST00000407776 448 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 UBE2V1P11-201ENST00000411559 285 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 AC234782.4-201ENST00000417646 1048 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.09□□□□□ -1.75
CHRNA1P02708 RPL7P29-201ENST00000437151 728 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 RPS3AP12-201ENST00000443616 753 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 MTND2P6-201ENST00000455337 1030 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 AC084198.1-201ENST00000477747 402 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.09□□□□□ -1.75
CHRNA1P02708 OR4C2P-201ENST00000530855 1064 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA1P02708 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.09□□□□□ -1.75
CHRNA1P02708 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.09□□□□□ -1.75
CHRNA1P02708 MTND4LP24-201ENST00000572277 291 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 MIR3200-201ENST00000580767 85 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.09□□□□□ -1.75
CHRNA1P02708 AC020914.6-201ENST00000594327 272 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 PCNAP1-202ENST00000595299 752 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 ELOCP35-201ENST00000604289 336 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 AC010680.4-201ENST00000605334 543 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 AC243312.2-201ENST00000623340 601 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.09□□□□□ -1.75
CHRNA1P02708 DCAF13P3-201ENST00000561147 1334 ntBASIC4.09□□□□□ -1.75
CHRNA1P02708 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA1P02708 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CHRNA1P02708 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CHRNA1P02708 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CHRNA1P02708 PRO1804-201ENST00000623780 2050 ntBASIC4.09□□□□□ -1.76
CHRNA1P02708 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CHRNA1P02708 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CHRNA1P02708 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRNA1P02708 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRNA1P02708 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRNA1P02708 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRNA1P02708 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
CHRNA1P02708 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.08□□□□□ -1.76
CHRNA1P02708 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms