Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.98□□□□□ -1.93
SPTA1P02549 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SPTA1P02549 RNA5SP42-201ENST00000364278 115 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 MIR513A2-201ENST00000385249 127 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.98□□□□□ -1.93
SPTA1P02549 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 RPL6P21-201ENST00000418672 846 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 NDUFB1P1-201ENST00000435191 180 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.98□□□□□ -1.93
SPTA1P02549 OR4R3P-201ENST00000525084 838 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.98□□□□□ -1.93
SPTA1P02549 BRDTP1-201ENST00000605735 677 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SPTA1P02549 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SPTA1P02549 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.97□□□□□ -1.93
SPTA1P02549 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SPTA1P02549 MIR184-201ENST00000384962 84 ntBASIC2.97□□□□□ -1.93
SPTA1P02549 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.97□□□□□ -1.93
SPTA1P02549 AC108938.1-201ENST00000451204 136 ntBASIC2.97□□□□□ -1.93
SPTA1P02549 RPS20P22-201ENST00000473700 357 ntBASIC2.97□□□□□ -1.93
SPTA1P02549 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.97□□□□□ -1.93
SPTA1P02549 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.97□□□□□ -1.93
SPTA1P02549 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.97□□□□□ -1.93
SPTA1P02549 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC2.97□□□□□ -1.93
SPTA1P02549 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC2.97□□□□□ -1.93
SPTA1P02549 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.97□□□□□ -1.93
SPTA1P02549 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.97□□□□□ -1.93
SPTA1P02549 OR13C3-201ENST00000374781 1108 ntBASIC2.97□□□□□ -1.93
SPTA1P02549 SNORA18.3-201ENST00000384122 132 ntBASIC2.97□□□□□ -1.93
SPTA1P02549 RPL35AP12-201ENST00000425362 338 ntBASIC2.97□□□□□ -1.93
SPTA1P02549 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.97□□□□□ -1.93
SPTA1P02549 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.97□□□□□ -1.93
SPTA1P02549 MAPRE1P3-201ENST00000435438 796 ntBASIC2.97□□□□□ -1.93
SPTA1P02549 AC092447.2-201ENST00000435487 669 ntBASIC2.97□□□□□ -1.93
SPTA1P02549 TPT1P1-201ENST00000458495 518 ntBASIC2.97□□□□□ -1.93
SPTA1P02549 FCF1P8-201ENST00000510322 597 ntBASIC2.97□□□□□ -1.93
SPTA1P02549 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.97□□□□□ -1.93
SPTA1P02549 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
SPTA1P02549 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.97□□□□□ -1.93
SPTA1P02549 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.97□□□□□ -1.93
SPTA1P02549 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC2.97□□□□□ -1.93
SPTA1P02549 AC016727.1-205ENST00000605437 569 ntBASIC2.97□□□□□ -1.93
SPTA1P02549 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.97□□□□□ -1.93
SPTA1P02549 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SPTA1P02549 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.97□□□□□ -1.93
SPTA1P02549 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
SPTA1P02549 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SPTA1P02549 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.96□□□□□ -1.94
SPTA1P02549 RNU6-482P-201ENST00000391068 107 ntBASIC2.96□□□□□ -1.94
SPTA1P02549 RNU4-47P-201ENST00000410876 114 ntBASIC2.96□□□□□ -1.94
SPTA1P02549 AC007563.3-201ENST00000433233 371 ntBASIC2.96□□□□□ -1.94
SPTA1P02549 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.96□□□□□ -1.94
SPTA1P02549 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.96□□□□□ -1.94
SPTA1P02549 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.96□□□□□ -1.94
SPTA1P02549 ANP32BP2-201ENST00000454525 545 ntBASIC2.96□□□□□ -1.94
SPTA1P02549 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.96□□□□□ -1.94
SPTA1P02549 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.96□□□□□ -1.94
SPTA1P02549 AC087888.1-201ENST00000550884 1254 ntBASIC2.96□□□□□ -1.94
SPTA1P02549 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.96□□□□□ -1.94
SPTA1P02549 AL162713.1-201ENST00000604480 262 ntBASIC2.96□□□□□ -1.94
SPTA1P02549 HSPA8P4-201ENST00000511877 1920 ntBASIC2.96□□□□□ -1.94
SPTA1P02549 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SPTA1P02549 AC125336.1-201ENST00000508893 2827 ntBASIC2.96□□□□□ -1.94
SPTA1P02549 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SPTA1P02549 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.96□□□□□ -1.94
SPTA1P02549 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.96□□□□□ -1.94
SPTA1P02549 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SPTA1P02549 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.96□□□□□ -1.94
SPTA1P02549 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SPTA1P02549 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SPTA1P02549 AC011266.1-201ENST00000624119 3569 ntBASIC2.96□□□□□ -1.94
SPTA1P02549 MIR7-2-201ENST00000384970 110 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 RPL21P40-201ENST00000428586 483 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 CKS1BP2-201ENST00000497342 240 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SPTA1P02549 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC2.95□□□□□ -1.94
SPTA1P02549 AP000926.4-201ENST00000527351 454 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.95□□□□□ -1.94
SPTA1P02549 AC025754.2-201ENST00000606491 432 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 AC105227.2-201ENST00000615075 605 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 AL645568.2-201ENST00000432815 1337 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 DCAF13P3-201ENST00000561147 1334 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SPTA1P02549 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
SPTA1P02549 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SPTA1P02549 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SPTA1P02549 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SPTA1P02549 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SPTA1P02549 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SPTA1P02549 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SPTA1P02549 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SPTA1P02549 AL391417.1-201ENST00000404100 426 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.95□□□□□ -1.94
SPTA1P02549 RN7SKP192-201ENST00000411291 327 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 AC007899.1-201ENST00000412776 775 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.95□□□□□ -1.94
SPTA1P02549 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.95□□□□□ -1.94
SPTA1P02549 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.95□□□□□ -1.94
SPTA1P02549 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms