Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC005344.1-201ENST00000613391 459 ntBASIC3.3□□□□□ -1.88
SGCEO43556 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.3□□□□□ -1.88
SGCEO43556 AL354798.1-201ENST00000622505 329 ntBASIC3.3□□□□□ -1.88
SGCEO43556 FP236240.3-201ENST00000623061 327 ntBASIC3.3□□□□□ -1.88
SGCEO43556 CDRT1-208ENST00000630868 794 ntBASIC3.3□□□□□ -1.88
SGCEO43556 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.3□□□□□ -1.88
SGCEO43556 AC119674.1-220ENST00000641502 1048 ntBASIC3.3□□□□□ -1.88
SGCEO43556 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SGCEO43556 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SGCEO43556 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 AP004289.2-201ENST00000444413 1457 ntBASIC3.29□□□□□ -1.88
SGCEO43556 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 HMGB1P13-201ENST00000406019 642 ntBASIC3.29□□□□□ -1.88
SGCEO43556 RNU2-65P-201ENST00000410162 185 ntBASIC3.29□□□□□ -1.88
SGCEO43556 LIPT1P1-201ENST00000415870 1186 ntBASIC3.29□□□□□ -1.88
SGCEO43556 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.29□□□□□ -1.88
SGCEO43556 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.29□□□□□ -1.88
SGCEO43556 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.29□□□□□ -1.88
SGCEO43556 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.29□□□□□ -1.88
SGCEO43556 RPL23AP33-201ENST00000442301 452 ntBASIC3.29□□□□□ -1.88
SGCEO43556 HMGB1P5-202ENST00000451497 985 ntBASIC3.29□□□□□ -1.88
SGCEO43556 NUTF2P7-201ENST00000453086 375 ntBASIC3.29□□□□□ -1.88
SGCEO43556 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.29□□□□□ -1.88
SGCEO43556 AP002345.1-201ENST00000456493 928 ntBASIC3.29□□□□□ -1.88
SGCEO43556 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.29□□□□□ -1.88
SGCEO43556 RNU6-352P-201ENST00000516908 107 ntBASIC3.29□□□□□ -1.88
SGCEO43556 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.29□□□□□ -1.88
SGCEO43556 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.29□□□□□ -1.88
SGCEO43556 AC006960.3-201ENST00000561845 705 ntBASIC3.29□□□□□ -1.88
SGCEO43556 MIR4697-201ENST00000582977 78 ntBASIC3.29□□□□□ -1.88
SGCEO43556 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.29□□□□□ -1.88
SGCEO43556 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.29□□□□□ -1.88
SGCEO43556 AL163642.2-201ENST00000604722 1019 ntBASIC3.29□□□□□ -1.88
SGCEO43556 SNORA62.6-201ENST00000606322 83 ntBASIC3.29□□□□□ -1.88
SGCEO43556 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.29□□□□□ -1.88
SGCEO43556 AC006946.3-201ENST00000609791 756 ntBASIC3.29□□□□□ -1.88
SGCEO43556 MIR6810-201ENST00000622701 70 ntBASIC3.29□□□□□ -1.88
SGCEO43556 SNORA50A-202ENST00000629536 136 ntBASIC3.29□□□□□ -1.88
SGCEO43556 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.29□□□□□ -1.88
SGCEO43556 FAM157B-203ENST00000639350 358 ntBASIC3.29□□□□□ -1.88
SGCEO43556 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SGCEO43556 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SGCEO43556 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SGCEO43556 AC007496.3-201ENST00000624987 3443 ntBASIC3.29□□□□□ -1.88
SGCEO43556 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SGCEO43556 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SGCEO43556 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.28□□□□□ -1.88
SGCEO43556 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SGCEO43556 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.28□□□□□ -1.88
SGCEO43556 MIR30B-201ENST00000384850 88 ntBASIC3.28□□□□□ -1.88
SGCEO43556 RNA5SP424-201ENST00000390988 115 ntBASIC3.28□□□□□ -1.88
SGCEO43556 ATP5F1P4-201ENST00000397288 746 ntBASIC3.28□□□□□ -1.88
SGCEO43556 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.28□□□□□ -1.88
SGCEO43556 AL691447.1-201ENST00000419456 387 ntBASIC3.28□□□□□ -1.88
SGCEO43556 TCEA1P2-201ENST00000420496 906 ntBASIC3.28□□□□□ -1.88
SGCEO43556 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.28□□□□□ -1.88
SGCEO43556 AC241520.1-201ENST00000422654 1099 ntBASIC3.28□□□□□ -1.88
SGCEO43556 AC091390.1-201ENST00000433904 331 ntBASIC3.28□□□□□ -1.88
SGCEO43556 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.28□□□□□ -1.88
SGCEO43556 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.28□□□□□ -1.88
SGCEO43556 AC239367.2-201ENST00000447309 705 ntBASIC3.28□□□□□ -1.88
SGCEO43556 NPM1P49-201ENST00000448027 714 ntBASIC3.28□□□□□ -1.88
SGCEO43556 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.28□□□□□ -1.88
SGCEO43556 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.28□□□□□ -1.88
SGCEO43556 AC104687.1-201ENST00000485829 412 ntBASIC3.28□□□□□ -1.88
SGCEO43556 HMGB1P3-201ENST00000502802 616 ntBASIC3.28□□□□□ -1.88
SGCEO43556 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.28□□□□□ -1.88
SGCEO43556 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.28□□□□□ -1.88
SGCEO43556 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.28□□□□□ -1.88
SGCEO43556 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.28□□□□□ -1.88
SGCEO43556 AL121766.1-201ENST00000547436 487 ntBASIC3.28□□□□□ -1.88
SGCEO43556 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.28□□□□□ -1.88
SGCEO43556 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.28□□□□□ -1.88
SGCEO43556 AC037471.2-201ENST00000564941 598 ntBASIC3.28□□□□□ -1.88
SGCEO43556 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.28□□□□□ -1.88
SGCEO43556 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SGCEO43556 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.28□□□□□ -1.88
SGCEO43556 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SGCEO43556 AC090912.3-201ENST00000609775 533 ntBASIC3.28□□□□□ -1.88
SGCEO43556 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SGCEO43556 AC079684.1-201ENST00000621405 437 ntBASIC3.28□□□□□ -1.88
SGCEO43556 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SGCEO43556 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SGCEO43556 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
SGCEO43556 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
SGCEO43556 AC021755.1-201ENST00000559747 1447 ntBASIC3.27□□□□□ -1.89
SGCEO43556 AL079305.1-201ENST00000623159 3008 ntBASIC3.27□□□□□ -1.89
SGCEO43556 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SGCEO43556 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SGCEO43556 EIF5P1-201ENST00000400019 1231 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms