Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RIPK2O43353 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.86□□□□□ -1.79
RIPK2O43353 AC108941.1-201ENST00000502853 530 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.86□□□□□ -1.79
RIPK2O43353 IGKV2-23-201ENST00000518729 323 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.86□□□□□ -1.79
RIPK2O43353 AF279873.1-201ENST00000523393 313 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.86□□□□□ -1.79
RIPK2O43353 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RIPK2O43353 OR5AP1P-201ENST00000529730 940 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.86□□□□□ -1.79
RIPK2O43353 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
RIPK2O43353 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.86□□□□□ -1.79
RIPK2O43353 OR4G1P-201ENST00000588632 938 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 AC008687.2-201ENST00000597865 520 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 BX323046.1-201ENST00000610145 535 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 AC114781.5-201ENST00000615297 108 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 AL391261.4-201ENST00000616012 481 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 AL121890.3-201ENST00000618494 516 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RIPK2O43353 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.86□□□□□ -1.79
RIPK2O43353 FRG1DP-201ENST00000635586 771 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.86□□□□□ -1.79
RIPK2O43353 AF001550.2-201ENST00000636643 217 ntBASIC3.86□□□□□ -1.79
RIPK2O43353 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.86□□□□□ -1.79
RIPK2O43353 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RIPK2O43353 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RIPK2O43353 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.86□□□□□ -1.79
RIPK2O43353 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RIPK2O43353 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.85□□□□□ -1.79
RIPK2O43353 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RIPK2O43353 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.85□□□□□ -1.79
RIPK2O43353 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.85□□□□□ -1.79
RIPK2O43353 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RIPK2O43353 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RIPK2O43353 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RIPK2O43353 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
RIPK2O43353 RNA5SP27-201ENST00000363839 119 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RIPK2O43353 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RIPK2O43353 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.85□□□□□ -1.79
RIPK2O43353 AP000567.1-201ENST00000406413 156 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 SNORA11C-201ENST00000408532 129 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 AC007390.1-201ENST00000415722 356 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 RPL23AP38-201ENST00000423801 469 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.85□□□□□ -1.79
RIPK2O43353 VDAC1P3-201ENST00000434069 851 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 NDUFB1P1-201ENST00000435191 180 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.85□□□□□ -1.79
RIPK2O43353 ELOCP13-201ENST00000443934 329 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.85□□□□□ -1.79
RIPK2O43353 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.85□□□□□ -1.79
RIPK2O43353 RPS23P7-201ENST00000466210 444 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 UQCRHP4-201ENST00000471686 272 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RIPK2O43353 AC015724.1-201ENST00000478577 156 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 RPL32P9-201ENST00000487963 407 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 NIPA2P2-201ENST00000496376 1083 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 AC026784.1-201ENST00000507986 352 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.85□□□□□ -1.79
RIPK2O43353 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.85□□□□□ -1.79
RIPK2O43353 PCBP2P3-201ENST00000509726 843 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RIPK2O43353 RN7SKP244-201ENST00000516513 307 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.85□□□□□ -1.79
RIPK2O43353 AC026616.1-201ENST00000523157 525 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.85□□□□□ -1.79
RIPK2O43353 AC012182.1-201ENST00000570133 895 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.85□□□□□ -1.79
RIPK2O43353 AC234771.5-201ENST00000600161 514 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 AL356218.2-201ENST00000605264 187 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 AC019193.2-201ENST00000610012 634 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 AL118556.2-201ENST00000614375 824 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 AC104307.1-201ENST00000616142 196 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.85□□□□□ -1.79
RIPK2O43353 U6.98-201ENST00000637157 84 ntBASIC3.85□□□□□ -1.79
RIPK2O43353 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RIPK2O43353 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RIPK2O43353 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RIPK2O43353 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RIPK2O43353 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.84□□□□□ -1.79
RIPK2O43353 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RIPK2O43353 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
RIPK2O43353 TNPO1P3-201ENST00000436471 2662 ntBASIC3.84□□□□□ -1.79
RIPK2O43353 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RIPK2O43353 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
RIPK2O43353 U1.1-201ENST00000384101 164 ntBASIC3.84□□□□□ -1.79
RIPK2O43353 AL356057.1-202ENST00000402263 756 ntBASIC3.84□□□□□ -1.79
RIPK2O43353 SNORA57.3-201ENST00000411095 141 ntBASIC3.84□□□□□ -1.79
RIPK2O43353 MTND4P22-201ENST00000413116 1169 ntBASIC3.84□□□□□ -1.79
RIPK2O43353 CRYBB2P1-203ENST00000415709 538 ntBASIC3.84□□□□□ -1.79
RIPK2O43353 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.84□□□□□ -1.79
RIPK2O43353 COX6CP15-201ENST00000426313 211 ntBASIC3.84□□□□□ -1.79
RIPK2O43353 DNAJC19P7-201ENST00000428811 344 ntBASIC3.84□□□□□ -1.79
RIPK2O43353 MTND4LP7-201ENST00000431728 294 ntBASIC3.84□□□□□ -1.79
RIPK2O43353 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.84□□□□□ -1.79
RIPK2O43353 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.84□□□□□ -1.79
RIPK2O43353 SETP5-201ENST00000437270 562 ntBASIC3.84□□□□□ -1.79
RIPK2O43353 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.84□□□□□ -1.79
RIPK2O43353 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms