Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM38O00635 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM38O00635 CKS1BP6-201ENST00000424932 240 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AC096632.1-201ENST00000427395 310 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM38O00635 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM38O00635 C8orf59P1-201ENST00000429930 303 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM38O00635 AL050321.1-201ENST00000432363 400 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 MTND1P32-201ENST00000433043 938 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 TMX2P1-201ENST00000436507 708 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM38O00635 AL445567.1-201ENST00000439121 144 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 MTND6P18-201ENST00000439477 513 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM38O00635 MTCO2P18-201ENST00000457151 658 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 snoU13.7-201ENST00000459220 104 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
TRIM38O00635 RPS20P21-201ENST00000466859 343 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AC108751.2-201ENST00000469993 231 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AC087879.1-201ENST00000474343 374 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 MTCO3P7-201ENST00000510008 774 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 MTCO2P32-201ENST00000514865 403 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AC012339.2-201ENST00000523996 453 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM38O00635 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM38O00635 PDCL2P2-201ENST00000533651 189 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM38O00635 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM38O00635 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM38O00635 AC068135.2-201ENST00000569293 1028 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM38O00635 AP003465.2-201ENST00000602571 373 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AL353621.2-201ENST00000605340 133 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AL031775.1-201ENST00000607014 887 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AC103591.3-201ENST00000608684 209 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM38O00635 AC087241.4-201ENST00000612441 480 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AC131159.1-201ENST00000621854 213 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM38O00635 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRIM38O00635 CDR1-202ENST00000625883 1485 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM38O00635 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM38O00635 MTND5P29-201ENST00000458676 1807 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TRIM38O00635 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRIM38O00635 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM38O00635 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM38O00635 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM38O00635 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM38O00635 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM38O00635 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM38O00635 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM38O00635 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
TRIM38O00635 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM38O00635 MAPK10-320ENST00000641462 6696 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM38O00635 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TRIM38O00635 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM38O00635 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM38O00635 AC005539.1-201ENST00000443768 1479 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM38O00635 AC104454.1-201ENST00000421341 1401 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM38O00635 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM38O00635 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM38O00635 RNU6-867P-201ENST00000364956 107 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM38O00635 RNU6-157P-201ENST00000383957 107 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 SNORA70.10-201ENST00000384515 134 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM38O00635 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 RNU2-42P-201ENST00000410697 113 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC006960.1-201ENST00000419980 153 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM38O00635 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM38O00635 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM38O00635 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM38O00635 RPS29P9-201ENST00000440360 171 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AL353572.1-201ENST00000442490 417 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM38O00635 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM38O00635 AC010733.1-201ENST00000451515 401 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 RPS27AP8-201ENST00000452665 445 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AURKAPS2-201ENST00000454983 333 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM38O00635 RPL23AP56-201ENST00000460778 453 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 RPS7P7-201ENST00000463499 571 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM38O00635 RPS3AP43-201ENST00000479743 781 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM38O00635 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM38O00635 AC111000.2-201ENST00000507775 550 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM38O00635 OR5H4P-201ENST00000510851 923 ntBASIC4.84□□□□□ -1.63
TRIM38O00635 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM38O00635 RN7SKP276-201ENST00000516242 268 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms