Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UPK1AO00322 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UPK1AO00322 ZNF285B-201ENST00000561698 1767 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UPK1AO00322 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UPK1AO00322 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
UPK1AO00322 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UPK1AO00322 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.3□□□□□ -1.88
UPK1AO00322 FABP12P1-201ENST00000401911 322 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 RN7SKP202-201ENST00000410439 330 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 RAB9AP3-201ENST00000412737 573 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 RANP4-201ENST00000413361 655 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.3□□□□□ -1.88
UPK1AO00322 BX890604.2-201ENST00000427883 474 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.3□□□□□ -1.88
UPK1AO00322 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.3□□□□□ -1.88
UPK1AO00322 AC007389.2-201ENST00000434630 306 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 RPL23AP22-201ENST00000437556 453 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 CBX1P4-201ENST00000439415 457 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AL357552.1-201ENST00000445254 415 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 RAB9AP1-201ENST00000449393 573 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.3□□□□□ -1.88
UPK1AO00322 HMGB1P26-201ENST00000452520 628 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 RPL9P32-201ENST00000464118 620 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AC023598.1-201ENST00000472521 361 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AC087385.1-201ENST00000475062 312 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.3□□□□□ -1.88
UPK1AO00322 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
UPK1AO00322 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.3□□□□□ -1.88
UPK1AO00322 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.3□□□□□ -1.88
UPK1AO00322 RNU1-95P-201ENST00000516357 160 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 RNU1-128P-201ENST00000516704 160 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AC104027.1-201ENST00000521887 300 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.3□□□□□ -1.88
UPK1AO00322 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.3□□□□□ -1.88
UPK1AO00322 GTF2IP22-201ENST00000554443 182 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.3□□□□□ -1.88
UPK1AO00322 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.3□□□□□ -1.88
UPK1AO00322 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.3□□□□□ -1.88
UPK1AO00322 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.3□□□□□ -1.88
UPK1AO00322 VN1R84P-201ENST00000593697 235 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AC022146.1-201ENST00000595307 847 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.3□□□□□ -1.88
UPK1AO00322 AC083899.3-201ENST00000603413 594 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AC010591.1-201ENST00000603941 649 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AC055764.2-201ENST00000610089 670 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 AC110801.1-201ENST00000623590 212 ntBASIC3.3□□□□□ -1.88
UPK1AO00322 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UPK1AO00322 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UPK1AO00322 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UPK1AO00322 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
UPK1AO00322 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UPK1AO00322 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
UPK1AO00322 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UPK1AO00322 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UPK1AO00322 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UPK1AO00322 FRG1CP-201ENST00000358464 769 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 RNU6-805P-201ENST00000365643 106 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UPK1AO00322 RNU6-152P-201ENST00000384037 107 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.29□□□□□ -1.88
UPK1AO00322 RPL36AP36-201ENST00000418616 301 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 UBE2V2P3-201ENST00000433562 437 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.29□□□□□ -1.88
UPK1AO00322 RPL7P47-201ENST00000497299 556 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 AC021146.5-201ENST00000503544 545 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.29□□□□□ -1.88
UPK1AO00322 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UPK1AO00322 RN7SKP18-201ENST00000516005 275 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 RNU6-1004P-201ENST00000516584 111 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 RN7SKP289-201ENST00000517244 295 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 AC022790.1-201ENST00000522872 204 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.29□□□□□ -1.88
UPK1AO00322 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.29□□□□□ -1.88
UPK1AO00322 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UPK1AO00322 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.29□□□□□ -1.88
UPK1AO00322 MIR548Y-201ENST00000582739 110 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 NF1P5-201ENST00000588287 448 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 AC006116.10-201ENST00000591836 581 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.29□□□□□ -1.88
UPK1AO00322 AL450489.1-201ENST00000612071 468 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 U4.6-201ENST00000621618 127 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 AC112200.1-201ENST00000625015 234 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.29□□□□□ -1.88
UPK1AO00322 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
UPK1AO00322 OTUD4P1-201ENST00000237841 3067 ntBASIC3.29□□□□□ -1.88
UPK1AO00322 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.29□□□□□ -1.88
UPK1AO00322 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.29□□□□□ -1.88
UPK1AO00322 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UPK1AO00322 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
UPK1AO00322 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
UPK1AO00322 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
UPK1AO00322 AC106871.1-201ENST00000568324 3102 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 Y_RNA.126-201ENST00000363382 111 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 RNU6-317P-201ENST00000384031 107 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 SNORA5A-201ENST00000384111 134 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms