Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 NEK4P1-201ENST00000433383 879 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AL645931.1-201ENST00000439737 410 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 U8.18-201ENST00000459285 133 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 HMGB3P14-201ENST00000494195 599 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC020893.1-201ENST00000502452 580 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC023141.12-201ENST00000512399 199 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 IGHV3-76-201ENST00000522465 295 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC007991.1-201ENST00000522680 631 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC023161.2-201ENST00000551218 780 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 BNIP3P5-201ENST00000562290 498 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC234775.3-201ENST00000564612 656 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC093227.2-201ENST00000589357 285 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC009948.4-201ENST00000604692 675 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC005972.3-201ENST00000606304 481 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AL592494.3-201ENST00000609485 464 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC069209.1-201ENST00000619282 651 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AP003355.3-201ENST00000623465 114 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC048347.1-201ENST00000624621 427 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC021755.1-201ENST00000559747 1447 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 RPL7P60-201ENST00000397636 735 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 U3.39-201ENST00000408569 239 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 RNU6ATAC-201ENST00000408749 126 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 CYCSP19-201ENST00000411715 316 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 BX890604.2-201ENST00000427883 474 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AL035246.1-201ENST00000433554 1255 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC093716.1-201ENST00000435923 377 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 RRM2P4-201ENST00000441721 562 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 SNORD105B-201ENST00000458770 79 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 RPL7P15-201ENST00000461190 712 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC023598.1-201ENST00000472521 361 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC021205.2-201ENST00000480069 347 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 FCF1P3-201ENST00000496394 590 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 RNU2-27P-201ENST00000516185 142 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC006077.1-201ENST00000604746 343 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC239803.2-201ENST00000610161 430 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 PLCE1P1-201ENST00000622094 305 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 AC110801.1-201ENST00000623590 212 ntBASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HLA-DRB4X5D2U9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 RNA5SP42-201ENST00000364278 115 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 RNA5SP235-201ENST00000365411 114 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 RPL21P17-201ENST00000397467 475 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 RN7SKP202-201ENST00000410439 330 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 RNA5SP107-201ENST00000411358 122 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 HMGB3P23-201ENST00000414981 585 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC007389.2-201ENST00000434630 306 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC021205.1-201ENST00000468797 348 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 RPL21P103-201ENST00000479921 488 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 HMGB1P21-201ENST00000502313 581 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms