Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.51□□□□□ -1.69
SNX9Q9Y5X1 LINC02211-204ENST00000642024 1070 ntBASIC4.51□□□□□ -1.69
SNX9Q9Y5X1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNX9Q9Y5X1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX9Q9Y5X1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SNX9Q9Y5X1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
SNX9Q9Y5X1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.51□□□□□ -1.69
SNX9Q9Y5X1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX9Q9Y5X1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AL139811.1-201ENST00000424779 2299 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 RNY3P9-201ENST00000384727 106 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AL049545.1-201ENST00000401856 572 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 MIR1179-201ENST00000408703 91 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 HMGB1P49-201ENST00000418882 569 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC004975.1-201ENST00000428733 208 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AL031663.1-201ENST00000437445 219 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 CBX1P4-201ENST00000439415 457 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 EEF1A1P39-201ENST00000440791 250 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC068135.1-201ENST00000446164 246 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC005002.1-201ENST00000447458 540 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 TPMTP4-201ENST00000450749 678 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC108043.1-201ENST00000512696 574 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 RNA5SP154-201ENST00000516193 111 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 MTND4LP24-201ENST00000572277 291 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 RN7SL600P-201ENST00000581811 299 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC091057.2-201ENST00000602594 792 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC008638.3-201ENST00000603341 463 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 DUXAP3-201ENST00000603616 594 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC114878.2-201ENST00000604863 1251 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC016877.3-201ENST00000606778 504 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 AC087190.4-201ENST00000574616 8334 ntBASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNX9Q9Y5X1 ZNF876P-202ENST00000398732 1485 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 USP9YP4-201ENST00000424401 1745 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC012321.1-201ENST00000561622 1588 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 NSRP1P1-201ENST00000444067 1693 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 MIR93-201ENST00000385024 80 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 VN1R8P-201ENST00000407739 893 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 RNA5SP104-201ENST00000410989 118 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 LINC01881-201ENST00000416103 412 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 ELOCP9-201ENST00000418624 239 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 SKP1P3-201ENST00000429280 487 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 RPL7P29-201ENST00000437151 728 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 RPS26P30-201ENST00000443431 335 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 Z83846.1-201ENST00000446798 265 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 RPL23AP44-201ENST00000482216 473 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 AC068587.1-201ENST00000483613 781 ntBASIC4.49□□□□□ -1.69
SNX9Q9Y5X1 RPL5P23-201ENST00000496040 868 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms