Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AC016065.2-201ENST00000514530 444 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 YPEL5P3-201ENST00000547227 352 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AL133457.1-201ENST00000564251 987 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AF230666.2-201ENST00000602328 725 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 RNU4-89P-201ENST00000607443 133 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 MIR6867-201ENST00000610636 67 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 STMN1P1-201ENST00000617809 440 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AC083865.1-201ENST00000636634 831 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 CASC19-261ENST00000641853 1638 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC009501.3-201ENST00000605001 1352 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 RNU6-600P-201ENST00000362524 99 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 RNU6-1243P-201ENST00000364028 107 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 RPS26P8-201ENST00000393490 348 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AL022722.2-201ENST00000402519 180 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 SNORA11B-201ENST00000408175 129 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 RNU4-6P-201ENST00000410804 122 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AL356095.1-201ENST00000417217 199 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 USP9YP31-201ENST00000431405 881 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AL513175.1-201ENST00000431492 780 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 RANP8-201ENST00000444720 713 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC068135.1-201ENST00000446164 246 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 RPL7P19-201ENST00000469948 618 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 HMGB1P38-201ENST00000490557 577 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 RNA5SP179-201ENST00000517284 121 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC139103.1-201ENST00000534696 1030 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC010735.1-201ENST00000567305 1026 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC012182.1-201ENST00000570133 895 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AP001542.1-201ENST00000591314 200 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 YWHAQP7-201ENST00000603536 658 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC091167.4-201ENST00000605079 184 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC005156.1-201ENST00000613371 573 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AL139089.1-201ENST00000620372 975 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 RLIMP1-201ENST00000339626 1680 ntBASIC3.39□□□□□ -1.87
RHBDD3Q9Y3P4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 SNORA70C-201ENST00000384538 135 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 MIR141-201ENST00000384975 95 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AL121972.1-201ENST00000402023 252 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 SFR1P1-201ENST00000403720 688 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AL138880.1-201ENST00000405824 642 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AL691449.1-201ENST00000426570 421 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 VDAC1P3-201ENST00000434069 851 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 XKRY2-201ENST00000442362 1093 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 ELOCP13-201ENST00000443934 329 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms