Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC112518.2-201ENST00000508565 425 ntBASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 HIGD1AP3-201ENST00000515857 278 ntBASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 MTND1P6-201ENST00000523621 946 ntBASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 AL355812.1-201ENST00000603215 216 ntBASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 AC114878.2-201ENST00000604863 1251 ntBASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 AC016542.1-201ENST00000608259 493 ntBASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 AP004247.3-201ENST00000608682 624 ntBASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 AC128687.2-201ENST00000609657 566 ntBASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 MIR378J-201ENST00000611988 109 ntBASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 MIR6830-201ENST00000636015 70 ntBASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 OR52H1-202ENST00000641796 1061 ntBASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA9Q9UGM1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC066616.2-201ENST00000559334 1481 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC016716.1-201ENST00000265882 708 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 SNORA62-201ENST00000365493 153 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 RNU6-444P-201ENST00000383988 108 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 RNU11-4P-201ENST00000391149 133 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 RPS26P8-201ENST00000393490 348 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 SSXP10-201ENST00000402595 565 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 PTP4A1P5-201ENST00000420305 455 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AL391219.1-201ENST00000422570 483 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC233981.1-201ENST00000423224 461 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AL009174.1-201ENST00000426577 416 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 RPS4XP4-201ENST00000443195 763 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AL929288.2-201ENST00000446368 407 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 RPS20P32-201ENST00000456044 356 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 HMGN2P7-201ENST00000456186 273 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 RN7SL271P-201ENST00000487601 295 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC121161.1-201ENST00000510606 652 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 PRELID3BP4-201ENST00000515476 571 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC091515.1-201ENST00000548110 679 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC011611.5-201ENST00000552477 578 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC009101.1-201ENST00000568135 242 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC012182.1-201ENST00000570133 895 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC025627.2-201ENST00000576220 160 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AP002906.1-201ENST00000603405 233 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC119501.1-201ENST00000603646 475 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC012531.5-201ENST00000611375 151 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC093875.1-201ENST00000623688 504 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AC090506.2-201ENST00000624521 419 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 AL355578.1-201ENST00000607405 1328 ntBASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA9Q9UGM1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 AL049693.1-201ENST00000402760 611 ntBASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 Y_RNA.625-201ENST00000411256 107 ntBASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 HSPE1P12-201ENST00000412576 301 ntBASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 UBE2V1P9-201ENST00000414760 368 ntBASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 MTND2P11-201ENST00000423638 648 ntBASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 AC096632.1-201ENST00000427395 310 ntBASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 AL358472.1-201ENST00000431295 329 ntBASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 RPL21P112-201ENST00000434403 463 ntBASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 B3GNT2P1-201ENST00000434960 952 ntBASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.68□□□□□ -1.82
CHRNA9Q9UGM1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms