Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.93□□□□□ -1.62
SEC61A2Q9H9S3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 RNA5SP131-201ENST00000365452 119 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.394-201ENST00000383942 103 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AL590290.1-201ENST00000405336 380 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AL136131.1-201ENST00000406079 803 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AL603766.1-201ENST00000407763 664 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 RNU2-28P-201ENST00000410457 189 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 RPSAP35-201ENST00000413753 818 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AL353193.1-201ENST00000421444 268 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 RPL7P54-201ENST00000438336 674 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 RPL22P17-201ENST00000438729 315 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 HMGB3P12-201ENST00000438745 556 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AL450996.1-201ENST00000445574 1202 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 RBMY2TP-201ENST00000451162 947 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 RPL23AP71-201ENST00000470966 469 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC006499.2-201ENST00000513470 337 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AP003072.1-201ENST00000531740 145 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 MIR4505-201ENST00000582238 73 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 TPMTP1-201ENST00000592307 737 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 BCRP9-201ENST00000605312 388 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC090948.2-201ENST00000607363 564 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AL161734.1-201ENST00000609720 557 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC009237.17-201ENST00000618111 748 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AC021106.3-201ENST00000623925 531 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 CCT4P2-201ENST00000233836 1548 ntBASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.92□□□□□ -1.62
SEC61A2Q9H9S3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 RNU4-79P-201ENST00000362764 141 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 RNU6-282P-201ENST00000365357 103 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 RNU6-1227P-201ENST00000383981 107 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 RNU6-317P-201ENST00000384031 107 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.419-201ENST00000384041 102 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 SNORA51.12-201ENST00000384448 134 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 MIR551A-201ENST00000385042 96 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AL049693.1-201ENST00000402760 611 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 RSU1P3-201ENST00000412878 835 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 RIMKLBP2-201ENST00000424737 654 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC113412.1-201ENST00000425840 504 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AL445669.1-201ENST00000426743 755 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC005534.2-201ENST00000431047 433 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 GTF2IP20-201ENST00000431663 360 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 RPL17P49-201ENST00000443728 411 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC073909.1-201ENST00000447112 999 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms