Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC010469.1-201ENST00000463864 576 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 RNA5SP367-201ENST00000516557 118 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 HMGB3P20-201ENST00000417997 600 ntBASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 FTH1P6-201ENST00000430768 320 ntBASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 RPS27AP9-201ENST00000477681 438 ntBASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 RN7SKP209-201ENST00000516888 304 ntBASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 AC010306.1-201ENST00000523223 1117 ntBASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 AL357552.1-201ENST00000445254 415 ntBASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 AC104687.1-201ENST00000485829 412 ntBASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 MAPK10-322ENST00000641485 4530 ntBASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 IPO8P1-201ENST00000455509 3109 ntBASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD1Q96PZ7 AL356057.1-202ENST00000402263 756 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 RN7SKP220-201ENST00000410611 288 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 MTND2P11-201ENST00000423638 648 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AC002075.2-201ENST00000425207 252 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 IFNNP1-201ENST00000429219 553 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AC099560.2-201ENST00000457554 255 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AC109329.2-201ENST00000519658 482 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AL049780.3-201ENST00000624612 1583 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 RPS3AP26-201ENST00000398259 784 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AL353692.2-201ENST00000407054 335 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 NECAP1P2-201ENST00000455668 727 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AC010468.1-201ENST00000461022 817 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 RPS3AP50-201ENST00000487064 803 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 RN7SL594P-201ENST00000470590 287 ntBASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
CSMD1Q96PZ7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 MIR22-201ENST00000362190 85 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 RPL21P109-201ENST00000422213 475 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 ETF1P3-201ENST00000430422 1160 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 AC069540.1-201ENST00000446320 988 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 EEF1B2P7-201ENST00000451177 676 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 PCBP2P3-201ENST00000509726 843 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 AC079600.2-201ENST00000550076 130 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 SNORD109B-201ENST00000458961 67 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 SNORD109A-201ENST00000459128 67 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 AC005798.1-201ENST00000513715 387 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 CR381670.1-201ENST00000624291 1693 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms