Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 HNRNPKP5-201ENST00000515300 253 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 RFPL1S-203ENST00000539579 330 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC012213.3-201ENST00000577199 777 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC091178.1-203ENST00000584586 279 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AP000811.1-201ENST00000603803 651 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 RN7SKP299-201ENST00000606679 301 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL133243.1-201ENST00000614487 366 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 U3.53-201ENST00000628922 216 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC025263.3-201ENST00000622965 1396 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 Z99496.1-201ENST00000469424 1477 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.21□□□□□ -1.73
CLIP4Q8N3C7 MAPK10-253ENST00000641010 4072 ntBASIC4.21□□□□□ -1.73
CLIP4Q8N3C7 AC010928.1-201ENST00000592477 1447 ntBASIC4.21□□□□□ -1.73
CLIP4Q8N3C7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CLIP4Q8N3C7 RNU6-931P-201ENST00000363850 107 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 OR52E6-202ENST00000379946 954 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 RN7SKP167-201ENST00000411047 285 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 VDAC1P9-201ENST00000412766 841 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC019050.1-201ENST00000418508 492 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AL022400.1-201ENST00000423946 935 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC104837.2-201ENST00000427236 424 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC008072.1-201ENST00000434254 824 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC092809.1-201ENST00000441469 474 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 TPTE2P6-202ENST00000445572 1007 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 COX6CP18-201ENST00000448769 222 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 TPMTP4-201ENST00000450749 678 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 RPL10P17-201ENST00000453852 316 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC091685.2-201ENST00000454924 864 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 RPS3AP41-201ENST00000462701 778 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC025445.1-201ENST00000502728 300 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC147055.4-201ENST00000504399 745 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 DSTNP2-201ENST00000504533 515 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 IGBP1P5-201ENST00000507524 1000 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 NDUFB5P1-201ENST00000508134 564 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC005178.1-201ENST00000508392 440 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 HSPE1P23-201ENST00000509838 286 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 MTND3P5-201ENST00000512798 333 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 OR7H2P-201ENST00000513483 306 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 IGLVIV-53-201ENST00000520107 367 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 MTCYBP20-201ENST00000524239 1129 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AF131215.7-201ENST00000602443 707 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC068790.6-201ENST00000602558 258 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC103881.1-201ENST00000603476 538 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AP003973.1-201ENST00000604639 691 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC010200.2-201ENST00000605098 235 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC092653.1-201ENST00000608509 531 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC103591.3-201ENST00000608684 209 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC069209.1-201ENST00000619282 651 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC010329.2-201ENST00000595195 2737 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms