Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC235565.1-201ENST00000456962 1325 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 OR11H5P-202ENST00000641612 1325 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC140479.2-201ENST00000421567 3130 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AL022578.1-201ENST00000439330 1433 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 Y_RNA.11-201ENST00000362375 109 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 Y_RNA.61-201ENST00000362835 102 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 RNU6-952P-201ENST00000391164 108 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 RNU2-41P-201ENST00000410991 178 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC079809.1-201ENST00000415468 276 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC004690.1-201ENST00000418216 328 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC245054.1-201ENST00000420944 258 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 RAD23BP1-201ENST00000421404 1227 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 MTCO1P20-201ENST00000425366 358 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 HMGN2P27-201ENST00000427352 270 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 MTCYBP45-201ENST00000435243 565 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC073465.2-201ENST00000440938 498 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 GAPDHP25-201ENST00000447061 1001 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC079448.1-201ENST00000449377 373 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC010301.1-201ENST00000473936 355 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 RN7SL799P-201ENST00000475891 298 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 RPS21P4-201ENST00000487122 248 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 FAM172BP-201ENST00000487497 1089 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 RPSAP51-201ENST00000497462 645 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC034159.1-201ENST00000513885 583 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 RNA5SP92-201ENST00000516437 110 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 MTND1P35-201ENST00000526739 508 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AP004607.2-201ENST00000533949 322 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 HAUS8P1-201ENST00000549005 542 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AL359219.2-201ENST00000555184 348 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC051619.2-201ENST00000559063 397 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 MIR4637-201ENST00000582405 84 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC007448.1-201ENST00000582714 234 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 TPMTP1-201ENST00000592307 737 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC008277.2-201ENST00000605196 797 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AL121612.2-201ENST00000612261 482 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC243654.2-201ENST00000612843 443 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC009268.2-201ENST00000621925 457 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC004009.2-201ENST00000623016 728 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 OR2L1P-202ENST00000641567 1023 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AC073869.8-201ENST00000641806 335 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 CASC19-221ENST00000641309 1382 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 AP001284.1-201ENST00000528393 2118 ntBASIC5.26□□□□□ -1.57
TRIM48Q8IWZ4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 AL353796.1-201ENST00000561542 3241 ntBASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 AC015813.6-201ENST00000624409 5808 ntBASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 Y_RNA.89-201ENST00000363031 102 ntBASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 DHFRP6-201ENST00000401776 268 ntBASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 PRRC2CP1-201ENST00000404428 159 ntBASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM48Q8IWZ4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms