Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 ATP1B1P1-201ENST00000509767 915 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 AC021146.1-201ENST00000511202 716 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 AC109471.1-201ENST00000511631 612 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 AP003066.2-201ENST00000529375 555 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 SYF2P1-201ENST00000550658 413 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 SULT1C2P1-202ENST00000562418 459 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 VN1R87P-201ENST00000596706 487 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 AC087763.1-201ENST00000603391 286 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 AL590282.1-201ENST00000610379 1136 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 FAM27B-201ENST00000610601 213 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 SDR42E1P1-201ENST00000611327 477 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 AC090506.2-201ENST00000624521 419 ntBASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.31□□□□□ -1.88
KCNIP4Q6PIL6 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 LINC00622-201ENST00000562811 1570 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 RNU5B-4P-201ENST00000363508 111 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 U3.30-201ENST00000391308 210 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 RNU2-71P-201ENST00000411395 189 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 RPS20P14-201ENST00000412545 360 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AL133384.1-201ENST00000412744 351 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 CHEK2P3-201ENST00000416118 248 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 Z93242.1-201ENST00000427102 353 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC241584.1-201ENST00000438469 1241 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 RPL23AP16-201ENST00000441715 421 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 PABPC1P3-201ENST00000469174 459 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AL136126.1-201ENST00000473603 402 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC104763.1-201ENST00000475274 360 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 VPS26AP1-201ENST00000483197 979 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 USP9YP5-201ENST00000511770 630 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC112198.4-201ENST00000515450 351 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 RNU6-885P-201ENST00000516607 104 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 RN7SKP289-201ENST00000517244 295 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 ZNF705CP-201ENST00000530515 889 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 LSM6P2-201ENST00000552208 177 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC069366.1-201ENST00000583159 838 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 MIR4691-201ENST00000583764 85 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 MRPS35P3-201ENST00000603189 709 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 Z82195.1-201ENST00000604558 398 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 MEMO1P5-201ENST00000604810 406 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AP005137.2-201ENST00000609238 400 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 VN1R74P-201ENST00000613259 503 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AL512624.1-201ENST00000613638 469 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AL391261.4-201ENST00000616012 481 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC018926.1-201ENST00000616335 435 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 MIR6729-201ENST00000618194 65 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC026634.1-201ENST00000634369 198 ntBASIC3.3□□□□□ -1.88
KCNIP4Q6PIL6 AC139713.2-210ENST00000641741 992 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms