Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC008694.2-201ENST00000517591 306 ntBASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AC090281.1-201ENST00000523019 276 ntBASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AP003730.1-201ENST00000524605 285 ntBASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 MTCYBP27-201ENST00000555160 670 ntBASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 RPL23AP97-201ENST00000568955 471 ntBASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 MIR3912-201ENST00000577566 105 ntBASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AL391001.1-201ENST00000602747 715 ntBASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AL160237.3-201ENST00000604114 1013 ntBASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AL138478.1-201ENST00000612252 832 ntBASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AC099669.2-201ENST00000616549 437 ntBASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AL731566.2-201ENST00000618971 317 ntBASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX30Q5VWJ9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AL355578.1-201ENST00000607405 1328 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 RNU1-85P-201ENST00000364127 164 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 SNORD116-23-201ENST00000384645 92 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 MIR217-201ENST00000384817 110 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AL133264.1-201ENST00000407157 562 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 RPL23AP26-201ENST00000412728 464 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 OR4K6P-201ENST00000416478 897 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 RPL31P45-201ENST00000419532 356 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 COX6CP15-201ENST00000426313 211 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 RPL36P19-201ENST00000430744 301 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 USP9YP24-201ENST00000434374 697 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 RPS3AP54-201ENST00000435535 734 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 RPL23AP52-201ENST00000439311 478 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 RRM2P4-201ENST00000441721 562 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AL512326.1-201ENST00000443050 721 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 USP9YP17-201ENST00000444617 696 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AL034418.1-201ENST00000448675 860 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 BX276092.4-201ENST00000452056 248 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 UQCRHP4-201ENST00000471686 272 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AC103987.1-201ENST00000473394 348 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 RPL35P6-201ENST00000490024 372 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AC005726.1-201ENST00000494679 427 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 RNF138P1-201ENST00000502765 546 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AC113420.1-201ENST00000507903 571 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 RNU6-885P-201ENST00000516607 104 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 RN7SKP277-201ENST00000516895 283 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AC008759.1-201ENST00000589783 983 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AL157392.4-201ENST00000609756 345 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AC091046.2-201ENST00000620775 665 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 MIR6715B-201ENST00000637172 77 ntBASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SNX30Q5VWJ9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 AL158163.1-201ENST00000603915 1649 ntBASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 RNU6-441P-201ENST00000384545 106 ntBASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 MIR513A2-201ENST00000385249 127 ntBASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 SSXP10-201ENST00000402595 565 ntBASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 AC009237.2-201ENST00000421358 284 ntBASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 HSFY1P1-201ENST00000423928 1178 ntBASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 Z93242.1-201ENST00000427102 353 ntBASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 PSMA2P3-201ENST00000429685 675 ntBASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX30Q5VWJ9 GTF2IP7-202ENST00000436677 309 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms