Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 CDY3P-201ENST00000454543 1618 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC245054.1-201ENST00000420944 258 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 COX6CP17-201ENST00000421389 185 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 OR8F1P-201ENST00000425243 930 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 HMGB1P12-201ENST00000438594 598 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC007967.1-201ENST00000455422 1159 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 RPL7P19-201ENST00000469948 618 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 TPT1P3-201ENST00000492841 512 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC051619.2-201ENST00000559063 397 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC078899.3-201ENST00000599065 212 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 MIR6716-201ENST00000613413 80 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AL355480.1-201ENST00000629041 99 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 AP004289.2-201ENST00000444413 1457 ntBASIC3.13□□□□□ -1.91
CCDC58Q4VC31 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CCDC58Q4VC31 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 SNORA70C-201ENST00000384538 135 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AL513174.1-201ENST00000423182 629 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC093151.1-201ENST00000427711 313 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC006511.1-201ENST00000470614 315 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC118282.1-201ENST00000506408 765 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC119751.1-201ENST00000513357 765 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 RANP9-201ENST00000519957 271 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC010653.1-201ENST00000571108 881 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AL591034.3-201ENST00000605511 685 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC069209.1-201ENST00000619282 651 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC010809.3-201ENST00000621310 641 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 MIR6730-201ENST00000622213 67 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AL357559.1-201ENST00000622228 274 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 FP236240.3-201ENST00000623061 327 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC58Q4VC31 AC007823.1-201ENST00000569932 1566 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 MTND4P34-201ENST00000572715 1371 ntBASIC3.12□□□□□ -1.91
CCDC58Q4VC31 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 RNU1-32P-201ENST00000363937 159 ntBASIC3.11□□□□□ -1.91
CCDC58Q4VC31 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
CCDC58Q4VC31 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 HMGN1P18-201ENST00000457642 277 ntBASIC3.11□□□□□ -1.91
CCDC58Q4VC31 RPS20P21-201ENST00000466859 343 ntBASIC3.11□□□□□ -1.91
CCDC58Q4VC31 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 RNU6-352P-201ENST00000516908 107 ntBASIC3.11□□□□□ -1.91
CCDC58Q4VC31 AC107934.2-201ENST00000518653 310 ntBASIC3.11□□□□□ -1.91
CCDC58Q4VC31 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms