Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 TPTE2P5-203ENST00000458118 728 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 RPL30P9-201ENST00000465586 330 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 PLGLA-201ENST00000465668 449 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 RN7SL244P-201ENST00000493405 297 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC008897.1-201ENST00000494006 347 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC021678.1-201ENST00000505195 936 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 COX6B1P5-201ENST00000509843 249 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 MEMO1P5-201ENST00000604810 406 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 RN7SKP299-201ENST00000606679 301 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AL031775.1-201ENST00000607014 887 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AL451064.1-201ENST00000607718 471 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC107214.2-201ENST00000608204 634 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AL357080.1-201ENST00000617394 239 ntBASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC144BQ3MJ40 AC135352.1-201ENST00000506173 1418 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC104118.1-201ENST00000607625 1589 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 RNU4-21P-201ENST00000362802 126 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 RNU6-878P-201ENST00000384578 110 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AL031679.1-201ENST00000400616 525 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 MIR1250-201ENST00000408098 113 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 U3.32-201ENST00000408116 212 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AL590139.1-201ENST00000416267 400 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 OR6C64P-201ENST00000419708 825 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 RPL34P6-201ENST00000432390 345 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 THAP5P1-201ENST00000439089 262 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 CYCSP24-201ENST00000445119 316 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 TAF9P1-201ENST00000445421 515 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 OR52J1P-201ENST00000450596 932 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 TAF9P2-201ENST00000454958 515 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 PABPC1P3-201ENST00000469174 459 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC087312.1-201ENST00000471411 480 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AL136126.1-201ENST00000473603 402 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC106872.3-201ENST00000495104 446 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 POU5F1P7-201ENST00000508759 541 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC109458.1-201ENST00000508858 316 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC024589.1-201ENST00000512207 263 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 OR5BC1P-201ENST00000529327 739 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC007115.1-201ENST00000546853 234 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 CENPUP2-201ENST00000555897 1186 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC073544.2-201ENST00000601155 540 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 U73023.1-201ENST00000603134 700 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AL138820.1-201ENST00000617901 5305 ntBASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CCDC144BQ3MJ40 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms