Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 NARSP2-201ENST00000518524 679 ntBASIC4.05□□□□□ -1.76
CACNA1SQ13698 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.05□□□□□ -1.76
CACNA1SQ13698 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.05□□□□□ -1.76
CACNA1SQ13698 AP003499.2-201ENST00000624100 483 ntBASIC4.05□□□□□ -1.76
CACNA1SQ13698 AC244205.2-202ENST00000635781 342 ntBASIC4.05□□□□□ -1.76
CACNA1SQ13698 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CACNA1SQ13698 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.05□□□□□ -1.76
CACNA1SQ13698 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
CACNA1SQ13698 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.05□□□□□ -1.76
CACNA1SQ13698 AL513302.2-201ENST00000562313 1842 ntBASIC4.05□□□□□ -1.76
CACNA1SQ13698 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.05□□□□□ -1.76
CACNA1SQ13698 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
CACNA1SQ13698 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CACNA1SQ13698 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CACNA1SQ13698 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.05□□□□□ -1.76
CACNA1SQ13698 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.05□□□□□ -1.76
CACNA1SQ13698 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CACNA1SQ13698 ATP5C1P1-201ENST00000441945 895 ntBASIC4.05□□□□□ -1.76
CACNA1SQ13698 RPL37P4-201ENST00000448908 268 ntBASIC4.05□□□□□ -1.76
CACNA1SQ13698 SCARNA20.6-201ENST00000517251 106 ntBASIC4.05□□□□□ -1.76
CACNA1SQ13698 AC006518.1-201ENST00000541449 943 ntBASIC4.05□□□□□ -1.76
CACNA1SQ13698 BNIP3P38-201ENST00000601117 544 ntBASIC4.05□□□□□ -1.76
CACNA1SQ13698 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CACNA1SQ13698 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CACNA1SQ13698 AC107027.3-201ENST00000565095 3473 ntBASIC4.04□□□□□ -1.76
CACNA1SQ13698 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 AC239798.3-201ENST00000454459 408 ntBASIC4.04□□□□□ -1.76
CACNA1SQ13698 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 PCBP2P3-201ENST00000509726 843 ntBASIC4.04□□□□□ -1.76
CACNA1SQ13698 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 GTF3AP2-201ENST00000557014 266 ntBASIC4.04□□□□□ -1.76
CACNA1SQ13698 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 AF117829.1-206ENST00000621883 3802 ntBASIC4.04□□□□□ -1.76
CACNA1SQ13698 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CACNA1SQ13698 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.04□□□□□ -1.76
CACNA1SQ13698 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CACNA1SQ13698 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CACNA1SQ13698 MIR449A-201ENST00000362113 91 ntBASIC4.03□□□□□ -1.76
CACNA1SQ13698 AL160175.1-201ENST00000428124 247 ntBASIC4.03□□□□□ -1.76
CACNA1SQ13698 HMGB3P9-201ENST00000441799 583 ntBASIC4.03□□□□□ -1.76
CACNA1SQ13698 AC010374.2-201ENST00000512933 535 ntBASIC4.03□□□□□ -1.76
CACNA1SQ13698 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.03□□□□□ -1.76
CACNA1SQ13698 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.03□□□□□ -1.76
CACNA1SQ13698 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.03□□□□□ -1.76
CACNA1SQ13698 AC013412.1-201ENST00000610687 192 ntBASIC4.03□□□□□ -1.76
CACNA1SQ13698 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.03□□□□□ -1.76
CACNA1SQ13698 AC018529.3-201ENST00000624212 2254 ntBASIC4.03□□□□□ -1.76
CACNA1SQ13698 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CACNA1SQ13698 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CACNA1SQ13698 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.03□□□□□ -1.76
CACNA1SQ13698 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
CACNA1SQ13698 AC233263.6-201ENST00000631132 1963 ntBASIC4.03□□□□□ -1.76
CACNA1SQ13698 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.03□□□□□ -1.76
CACNA1SQ13698 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
CACNA1SQ13698 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CACNA1SQ13698 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CACNA1SQ13698 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CACNA1SQ13698 AL138885.1-201ENST00000405921 675 ntBASIC4.03□□□□□ -1.77
CACNA1SQ13698 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.03□□□□□ -1.77
CACNA1SQ13698 MTCO3P16-201ENST00000454456 754 ntBASIC4.03□□□□□ -1.77
CACNA1SQ13698 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.03□□□□□ -1.77
CACNA1SQ13698 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.03□□□□□ -1.77
CACNA1SQ13698 RN7SKP132-201ENST00000516001 208 ntBASIC4.03□□□□□ -1.77
CACNA1SQ13698 OR4R3P-201ENST00000525084 838 ntBASIC4.03□□□□□ -1.77
CACNA1SQ13698 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.03□□□□□ -1.77
CACNA1SQ13698 AC022080.3-201ENST00000544433 482 ntBASIC4.03□□□□□ -1.77
CACNA1SQ13698 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.03□□□□□ -1.77
CACNA1SQ13698 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.03□□□□□ -1.77
CACNA1SQ13698 AC106785.3-201ENST00000564064 847 ntBASIC4.03□□□□□ -1.77
CACNA1SQ13698 CYP2C60P-201ENST00000566088 139 ntBASIC4.03□□□□□ -1.77
CACNA1SQ13698 UBL5P2-201ENST00000583788 219 ntBASIC4.03□□□□□ -1.77
CACNA1SQ13698 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.03□□□□□ -1.77
CACNA1SQ13698 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CACNA1SQ13698 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.03□□□□□ -1.77
CACNA1SQ13698 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 MTCO1P22-201ENST00000604619 1360 ntBASIC4.02□□□□□ -1.77
CACNA1SQ13698 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CACNA1SQ13698 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CACNA1SQ13698 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CACNA1SQ13698 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CACNA1SQ13698 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.02□□□□□ -1.77
CACNA1SQ13698 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms