Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AURKAPS2-201ENST00000454983 333 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AC109486.1-201ENST00000486833 374 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.63□□□□□ -1.51
MRE11P49959 AC104108.1-201ENST00000509930 412 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AC109445.1-201ENST00000512356 383 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AC004980.4-201ENST00000513375 203 ntBASIC5.63□□□□□ -1.51
MRE11P49959 RNU6-1178P-201ENST00000516674 107 ntBASIC5.63□□□□□ -1.51
MRE11P49959 IGHV3-63-201ENST00000518422 341 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.63□□□□□ -1.51
MRE11P49959 AC124293.1-201ENST00000530034 493 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.63□□□□□ -1.51
MRE11P49959 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.63□□□□□ -1.51
MRE11P49959 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.63□□□□□ -1.51
MRE11P49959 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.63□□□□□ -1.51
MRE11P49959 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.63□□□□□ -1.51
MRE11P49959 MIR4666A-201ENST00000580160 79 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.63□□□□□ -1.51
MRE11P49959 AC103881.1-201ENST00000603476 538 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AC009220.3-201ENST00000604318 586 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AL391497.1-201ENST00000608671 547 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AC131235.4-201ENST00000609288 620 ntBASIC5.63□□□□□ -1.51
MRE11P49959 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.63□□□□□ -1.51
MRE11P49959 EIF3FP1-201ENST00000613970 806 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AC023158.2-201ENST00000614876 543 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.63□□□□□ -1.51
MRE11P49959 U6.42-201ENST00000618440 107 ntBASIC5.63□□□□□ -1.51
MRE11P49959 PCMTD1P7-201ENST00000634506 357 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AC116618.1-201ENST00000634617 774 ntBASIC5.63□□□□□ -1.51
MRE11P49959 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.63□□□□□ -1.51
MRE11P49959 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.63□□□□□ -1.51
MRE11P49959 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.63□□□□□ -1.51
MRE11P49959 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MRE11P49959 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MRE11P49959 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MRE11P49959 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
MRE11P49959 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.63□□□□□ -1.51
MRE11P49959 NSRP1P1-201ENST00000444067 1693 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AC012020.1-201ENST00000624541 1728 ntBASIC5.62□□□□□ -1.51
MRE11P49959 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MRE11P49959 AC068254.2-201ENST00000623938 3577 ntBASIC5.62□□□□□ -1.51
MRE11P49959 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
MRE11P49959 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MRE11P49959 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MRE11P49959 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.62□□□□□ -1.51
MRE11P49959 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
MRE11P49959 AC079741.1-201ENST00000321498 212 ntBASIC5.62□□□□□ -1.51
MRE11P49959 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
MRE11P49959 RNU6-500P-201ENST00000362349 107 ntBASIC5.62□□□□□ -1.51
MRE11P49959 Y_RNA.359-201ENST00000365498 102 ntBASIC5.62□□□□□ -1.51
MRE11P49959 MIR105-1-201ENST00000385222 81 ntBASIC5.62□□□□□ -1.51
MRE11P49959 MIR134-201ENST00000385258 73 ntBASIC5.62□□□□□ -1.51
MRE11P49959 RNA5SP339-201ENST00000390987 122 ntBASIC5.62□□□□□ -1.51
MRE11P49959 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MRE11P49959 RPS27AP11-201ENST00000402798 447 ntBASIC5.62□□□□□ -1.51
MRE11P49959 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.62□□□□□ -1.51
MRE11P49959 TCEA1P4-201ENST00000415066 844 ntBASIC5.62□□□□□ -1.51
MRE11P49959 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.62□□□□□ -1.51
MRE11P49959 MED14P1-201ENST00000430517 648 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.62□□□□□ -1.51
MRE11P49959 HMGB1P45-201ENST00000435986 653 ntBASIC5.62□□□□□ -1.51
MRE11P49959 RPL7L1P1-201ENST00000448259 785 ntBASIC5.62□□□□□ -1.51
MRE11P49959 KATNBL1P6-201ENST00000453433 915 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AL513533.1-201ENST00000453728 415 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.62□□□□□ -1.51
MRE11P49959 PSMC1P13-201ENST00000458195 985 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AC104763.1-201ENST00000475274 360 ntBASIC5.62□□□□□ -1.51
MRE11P49959 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.62□□□□□ -1.51
MRE11P49959 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.62□□□□□ -1.51
MRE11P49959 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MRE11P49959 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.62□□□□□ -1.51
MRE11P49959 AC010285.3-201ENST00000511668 676 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.62□□□□□ -1.51
MRE11P49959 RN7SKP122-201ENST00000515923 296 ntBASIC5.62□□□□□ -1.51
MRE11P49959 RNU6-1004P-201ENST00000516584 111 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.62□□□□□ -1.51
MRE11P49959 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.62□□□□□ -1.51
MRE11P49959 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.62□□□□□ -1.51
MRE11P49959 AL139174.1-201ENST00000531489 886 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AC009643.1-201ENST00000532030 391 ntBASIC5.62□□□□□ -1.51
MRE11P49959 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
MRE11P49959 AC025260.1-201ENST00000548858 430 ntBASIC5.62□□□□□ -1.51
MRE11P49959 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
MRE11P49959 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
MRE11P49959 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.62□□□□□ -1.51
MRE11P49959 AL133241.1-201ENST00000556832 487 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AC234778.2-201ENST00000566241 354 ntBASIC5.62□□□□□ -1.51
MRE11P49959 MIR4429-201ENST00000580105 73 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AL031775.1-201ENST00000607014 887 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AC023813.4-201ENST00000607580 580 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AC010678.1-201ENST00000614118 713 ntBASIC5.62□□□□□ -1.51
MRE11P49959 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AC005858.4-201ENST00000623191 700 ntBASIC5.62□□□□□ -1.51
MRE11P49959 AC127502.3-201ENST00000636170 1206 ntBASIC5.62□□□□□ -1.51
MRE11P49959 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MRE11P49959 HSPA8P17-201ENST00000427029 1382 ntBASIC5.62□□□□□ -1.51
MRE11P49959 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MRE11P49959 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
MRE11P49959 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.62□□□□□ -1.51
MRE11P49959 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MRE11P49959 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms