Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC073264.2-201ENST00000448886 166 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.68□□□□□ -1.66
MMP13P45452 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.68□□□□□ -1.66
MMP13P45452 UBTFL6-201ENST00000477929 1024 ntBASIC4.68□□□□□ -1.66
MMP13P45452 CDH12P2-201ENST00000504393 298 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AC004069.2-201ENST00000505438 1114 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AC006499.6-201ENST00000511169 607 ntBASIC4.68□□□□□ -1.66
MMP13P45452 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.68□□□□□ -1.66
MMP13P45452 MTCYBP41-201ENST00000528913 1123 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP13P45452 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.68□□□□□ -1.66
MMP13P45452 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP13P45452 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP13P45452 CYP2C60P-201ENST00000566088 139 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AC012414.6-201ENST00000568241 401 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP13P45452 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.68□□□□□ -1.66
MMP13P45452 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP13P45452 AC125494.3-201ENST00000602759 455 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AC021749.1-201ENST00000604322 607 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AC018618.2-201ENST00000604770 446 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.68□□□□□ -1.66
MMP13P45452 AC004948.1-201ENST00000609858 672 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AC109347.2-201ENST00000610220 349 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AC008083.4-201ENST00000615076 444 ntBASIC4.68□□□□□ -1.66
MMP13P45452 MIR6780A-201ENST00000615089 68 ntBASIC4.68□□□□□ -1.66
MMP13P45452 MIR4278-201ENST00000636094 69 ntBASIC4.68□□□□□ -1.66
MMP13P45452 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MMP13P45452 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
MMP13P45452 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MMP13P45452 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MMP13P45452 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP13P45452 AC009313.2-201ENST00000417893 1941 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.68□□□□□ -1.66
MMP13P45452 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
MMP13P45452 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
MMP13P45452 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.68□□□□□ -1.66
MMP13P45452 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
MMP13P45452 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
MMP13P45452 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP13P45452 AC087359.1-201ENST00000508335 1740 ntBASIC4.67□□□□□ -1.66
MMP13P45452 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
MMP13P45452 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP13P45452 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MMP13P45452 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP13P45452 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP13P45452 AC021146.4-201ENST00000309229 279 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AC067945.1-201ENST00000342609 618 ntBASIC4.67□□□□□ -1.66
MMP13P45452 RNU6-543P-201ENST00000362576 108 ntBASIC4.67□□□□□ -1.66
MMP13P45452 RNU6-707P-201ENST00000364647 95 ntBASIC4.67□□□□□ -1.66
MMP13P45452 RNVU1-6-201ENST00000364688 164 ntBASIC4.67□□□□□ -1.66
MMP13P45452 Y_RNA.359-201ENST00000365498 102 ntBASIC4.67□□□□□ -1.66
MMP13P45452 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
MMP13P45452 RNU6-178P-201ENST00000384631 104 ntBASIC4.67□□□□□ -1.66
MMP13P45452 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
MMP13P45452 RNA5SP397-201ENST00000391323 118 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AC093719.1-202ENST00000392735 373 ntBASIC4.67□□□□□ -1.66
MMP13P45452 RPL23AP59-201ENST00000399415 461 ntBASIC4.67□□□□□ -1.66
MMP13P45452 RNU6-920P-201ENST00000410926 92 ntBASIC4.67□□□□□ -1.66
MMP13P45452 USP9YP33-201ENST00000412220 421 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP13P45452 RPS26P30-201ENST00000443431 335 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AL592437.1-201ENST00000443781 492 ntBASIC4.67□□□□□ -1.66
MMP13P45452 HMGB1P48-201ENST00000446155 598 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP13P45452 CEACAMP6-201ENST00000452007 574 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.67□□□□□ -1.66
MMP13P45452 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.67□□□□□ -1.66
MMP13P45452 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.67□□□□□ -1.66
MMP13P45452 AC025445.1-201ENST00000502728 300 ntBASIC4.67□□□□□ -1.66
MMP13P45452 CBX3P3-201ENST00000508108 532 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP13P45452 AC079140.3-201ENST00000511111 550 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP13P45452 AC091965.2-201ENST00000512324 613 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AC108120.2-201ENST00000512973 294 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AC108471.1-201ENST00000513977 287 ntBASIC4.67□□□□□ -1.66
MMP13P45452 PRELID3BP4-201ENST00000515476 571 ntBASIC4.67□□□□□ -1.66
MMP13P45452 MTND4LP26-201ENST00000518144 282 ntBASIC4.67□□□□□ -1.66
MMP13P45452 HIGD1AP18-201ENST00000520730 278 ntBASIC4.67□□□□□ -1.66
MMP13P45452 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.67□□□□□ -1.66
MMP13P45452 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.67□□□□□ -1.66
MMP13P45452 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.67□□□□□ -1.66
MMP13P45452 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
MMP13P45452 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.67□□□□□ -1.66
MMP13P45452 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP13P45452 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP13P45452 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.67□□□□□ -1.66
MMP13P45452 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.67□□□□□ -1.66
MMP13P45452 EIF1P4-201ENST00000572664 335 ntBASIC4.67□□□□□ -1.66
MMP13P45452 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP13P45452 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP13P45452 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.67□□□□□ -1.66
MMP13P45452 AC008638.3-201ENST00000603341 463 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AL139395.1-201ENST00000603662 160 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AC010201.1-201ENST00000605051 540 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AC116651.1-201ENST00000609724 556 ntBASIC4.67□□□□□ -1.66
MMP13P45452 AC087241.4-201ENST00000612441 480 ntBASIC4.67□□□□□ -1.66
MMP13P45452 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
MMP13P45452 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms