Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTSKP43235 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CTSKP43235 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTSKP43235 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTSKP43235 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTSKP43235 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTSKP43235 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.53□□□□□ -1.52
CTSKP43235 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTSKP43235 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTSKP43235 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.52□□□□□ -1.53
CTSKP43235 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CTSKP43235 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.52□□□□□ -1.53
CTSKP43235 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.52□□□□□ -1.53
CTSKP43235 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CTSKP43235 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.52□□□□□ -1.53
CTSKP43235 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.52□□□□□ -1.53
CTSKP43235 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.52□□□□□ -1.53
CTSKP43235 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 AP002907.1-201ENST00000606361 1430 ntBASIC5.52□□□□□ -1.53
CTSKP43235 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CTSKP43235 Y_RNA.72-201ENST00000362894 103 ntBASIC5.52□□□□□ -1.53
CTSKP43235 RNU4-73P-201ENST00000363164 141 ntBASIC5.52□□□□□ -1.53
CTSKP43235 RNU6-1322P-201ENST00000364309 107 ntBASIC5.52□□□□□ -1.53
CTSKP43235 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CTSKP43235 JKAMPP1-201ENST00000413804 919 ntBASIC5.52□□□□□ -1.53
CTSKP43235 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.52□□□□□ -1.53
CTSKP43235 RAD23BP1-201ENST00000421404 1227 ntBASIC5.52□□□□□ -1.53
CTSKP43235 RPL7P57-201ENST00000423238 740 ntBASIC5.52□□□□□ -1.53
CTSKP43235 AL445669.1-201ENST00000426743 755 ntBASIC5.52□□□□□ -1.53
CTSKP43235 HMGB3P12-201ENST00000438745 556 ntBASIC5.52□□□□□ -1.53
CTSKP43235 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.52□□□□□ -1.53
CTSKP43235 AC022364.2-201ENST00000457963 554 ntBASIC5.52□□□□□ -1.53
CTSKP43235 DUTP1-201ENST00000493631 470 ntBASIC5.52□□□□□ -1.53
CTSKP43235 RN7SL808P-201ENST00000496066 299 ntBASIC5.52□□□□□ -1.53
CTSKP43235 AC022832.1-201ENST00000530718 645 ntBASIC5.52□□□□□ -1.53
CTSKP43235 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.52□□□□□ -1.53
CTSKP43235 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.52□□□□□ -1.53
CTSKP43235 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.52□□□□□ -1.53
CTSKP43235 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.52□□□□□ -1.53
CTSKP43235 AC107954.1-201ENST00000565906 727 ntBASIC5.52□□□□□ -1.53
CTSKP43235 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.52□□□□□ -1.53
CTSKP43235 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.52□□□□□ -1.53
CTSKP43235 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.52□□□□□ -1.53
CTSKP43235 AC011468.4-201ENST00000603942 409 ntBASIC5.52□□□□□ -1.53
CTSKP43235 AC087283.1-201ENST00000604029 1074 ntBASIC5.52□□□□□ -1.53
CTSKP43235 AC093788.1-201ENST00000609356 927 ntBASIC5.52□□□□□ -1.53
CTSKP43235 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.52□□□□□ -1.53
CTSKP43235 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.52□□□□□ -1.53
CTSKP43235 AC068870.2-201ENST00000620635 389 ntBASIC5.52□□□□□ -1.53
CTSKP43235 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.52□□□□□ -1.53
CTSKP43235 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.52□□□□□ -1.53
CTSKP43235 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.52□□□□□ -1.53
CTSKP43235 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
CTSKP43235 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CTSKP43235 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.52□□□□□ -1.53
CTSKP43235 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CTSKP43235 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CTSKP43235 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.52□□□□□ -1.53
CTSKP43235 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTSKP43235 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTSKP43235 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CTSKP43235 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CTSKP43235 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTSKP43235 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTSKP43235 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CTSKP43235 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.51□□□□□ -1.53
CTSKP43235 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTSKP43235 RPL23AP57-201ENST00000332361 466 ntBASIC5.51□□□□□ -1.53
CTSKP43235 RNU6-984P-201ENST00000363236 109 ntBASIC5.51□□□□□ -1.53
CTSKP43235 U8.4-201ENST00000363626 134 ntBASIC5.51□□□□□ -1.53
CTSKP43235 RNA5SP335-201ENST00000363817 110 ntBASIC5.51□□□□□ -1.53
CTSKP43235 SNORA5.1-201ENST00000384275 131 ntBASIC5.51□□□□□ -1.53
CTSKP43235 RPS20P2-201ENST00000402520 389 ntBASIC5.51□□□□□ -1.53
CTSKP43235 MRPL42P2-201ENST00000403169 426 ntBASIC5.51□□□□□ -1.53
CTSKP43235 RN7SKP125-201ENST00000410481 302 ntBASIC5.51□□□□□ -1.53
CTSKP43235 RN7SKP213-201ENST00000410746 298 ntBASIC5.51□□□□□ -1.53
CTSKP43235 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.51□□□□□ -1.53
CTSKP43235 AC008850.1-201ENST00000427546 362 ntBASIC5.51□□□□□ -1.53
CTSKP43235 NPM1P24-201ENST00000428039 894 ntBASIC5.51□□□□□ -1.53
CTSKP43235 USP9YP9-201ENST00000429406 715 ntBASIC5.51□□□□□ -1.53
CTSKP43235 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.51□□□□□ -1.53
CTSKP43235 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.51□□□□□ -1.53
CTSKP43235 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.51□□□□□ -1.53
CTSKP43235 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.51□□□□□ -1.53
CTSKP43235 AC026410.2-201ENST00000460281 156 ntBASIC5.51□□□□□ -1.53
CTSKP43235 AC090142.1-201ENST00000465776 462 ntBASIC5.51□□□□□ -1.53
CTSKP43235 RPSAP50-201ENST00000481955 852 ntBASIC5.51□□□□□ -1.53
CTSKP43235 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.51□□□□□ -1.53
CTSKP43235 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.51□□□□□ -1.53
CTSKP43235 RN7SKP99-201ENST00000517028 307 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms