Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RFC3P40938 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFC3P40938 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.49□□□□□ -1.85
RFC3P40938 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.49□□□□□ -1.85
RFC3P40938 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFC3P40938 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RFC3P40938 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFC3P40938 SNORA5A-201ENST00000384111 134 ntBASIC3.49□□□□□ -1.85
RFC3P40938 HNRNPDP2-201ENST00000406475 478 ntBASIC3.49□□□□□ -1.85
RFC3P40938 MTCO3P4-201ENST00000419236 787 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AL591419.1-201ENST00000427423 339 ntBASIC3.49□□□□□ -1.85
RFC3P40938 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFC3P40938 YME1L1P1-201ENST00000429435 297 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AC091286.1-201ENST00000431233 461 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AC011742.1-201ENST00000431448 434 ntBASIC3.49□□□□□ -1.85
RFC3P40938 ATP5HP2-201ENST00000433885 485 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AC083863.1-201ENST00000438811 231 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AL353093.1-201ENST00000441292 436 ntBASIC3.49□□□□□ -1.85
RFC3P40938 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.49□□□□□ -1.85
RFC3P40938 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.49□□□□□ -1.85
RFC3P40938 NANOGP10-201ENST00000453325 895 ntBASIC3.49□□□□□ -1.85
RFC3P40938 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.49□□□□□ -1.85
RFC3P40938 SNORD108-201ENST00000459332 71 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AC104687.1-201ENST00000485829 412 ntBASIC3.49□□□□□ -1.85
RFC3P40938 RN7SL271P-201ENST00000487601 295 ntBASIC3.49□□□□□ -1.85
RFC3P40938 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.49□□□□□ -1.85
RFC3P40938 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.49□□□□□ -1.85
RFC3P40938 AC110792.2-201ENST00000510278 224 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.49□□□□□ -1.85
RFC3P40938 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFC3P40938 PDCL2P2-201ENST00000533651 189 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.49□□□□□ -1.85
RFC3P40938 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.49□□□□□ -1.85
RFC3P40938 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.49□□□□□ -1.85
RFC3P40938 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.49□□□□□ -1.85
RFC3P40938 MIR3186-201ENST00000577404 85 ntBASIC3.49□□□□□ -1.85
RFC3P40938 MIR5047-201ENST00000579212 100 ntBASIC3.49□□□□□ -1.85
RFC3P40938 CBX3P2-202ENST00000583365 535 ntBASIC3.49□□□□□ -1.85
RFC3P40938 CCDC58P3-201ENST00000590792 430 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AL392112.1-201ENST00000605115 829 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.49□□□□□ -1.85
RFC3P40938 AC008121.2-201ENST00000614647 523 ntBASIC3.49□□□□□ -1.85
RFC3P40938 AC092628.2-201ENST00000622492 339 ntBASIC3.49□□□□□ -1.85
RFC3P40938 C2orf27A-204ENST00000623058 969 ntBASIC3.49□□□□□ -1.85
RFC3P40938 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFC3P40938 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFC3P40938 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFC3P40938 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RFC3P40938 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RFC3P40938 DDX6P1-205ENST00000441966 1436 ntBASIC3.48□□□□□ -1.85
RFC3P40938 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RFC3P40938 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RFC3P40938 SNORD6-201ENST00000365444 73 ntBASIC3.48□□□□□ -1.85
RFC3P40938 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RFC3P40938 RNU6-98P-201ENST00000384173 107 ntBASIC3.48□□□□□ -1.85
RFC3P40938 RNU6-40P-201ENST00000384254 107 ntBASIC3.48□□□□□ -1.85
RFC3P40938 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RFC3P40938 RNU6-328P-201ENST00000390887 106 ntBASIC3.48□□□□□ -1.85
RFC3P40938 RPL21P17-201ENST00000397467 475 ntBASIC3.48□□□□□ -1.85
RFC3P40938 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.48□□□□□ -1.85
RFC3P40938 ZNF602P-201ENST00000405929 924 ntBASIC3.48□□□□□ -1.85
RFC3P40938 PRELID3BP11-201ENST00000414230 479 ntBASIC3.48□□□□□ -1.85
RFC3P40938 AC127526.1-201ENST00000417526 366 ntBASIC3.48□□□□□ -1.85
RFC3P40938 RPL31P45-201ENST00000419532 356 ntBASIC3.48□□□□□ -1.85
RFC3P40938 ELOCP6-201ENST00000429066 328 ntBASIC3.48□□□□□ -1.85
RFC3P40938 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.48□□□□□ -1.85
RFC3P40938 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.48□□□□□ -1.85
RFC3P40938 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
RFC3P40938 HMGB3P8-201ENST00000449709 577 ntBASIC3.48□□□□□ -1.85
RFC3P40938 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.48□□□□□ -1.85
RFC3P40938 ELOCP12-201ENST00000458706 328 ntBASIC3.48□□□□□ -1.85
RFC3P40938 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.48□□□□□ -1.85
RFC3P40938 HMGN1P11-201ENST00000508668 303 ntBASIC3.48□□□□□ -1.85
RFC3P40938 RN7SKP157-201ENST00000516174 282 ntBASIC3.48□□□□□ -1.85
RFC3P40938 RNU1-95P-201ENST00000516357 160 ntBASIC3.48□□□□□ -1.85
RFC3P40938 RNU1-128P-201ENST00000516704 160 ntBASIC3.48□□□□□ -1.85
RFC3P40938 IGKV2-23-201ENST00000518729 323 ntBASIC3.48□□□□□ -1.85
RFC3P40938 AC008802.1-201ENST00000519121 791 ntBASIC3.48□□□□□ -1.85
RFC3P40938 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.48□□□□□ -1.85
RFC3P40938 PTP4A1P6-201ENST00000531034 478 ntBASIC3.48□□□□□ -1.85
RFC3P40938 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.48□□□□□ -1.85
RFC3P40938 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.48□□□□□ -1.85
RFC3P40938 NOP56P3-201ENST00000549457 385 ntBASIC3.48□□□□□ -1.85
RFC3P40938 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.48□□□□□ -1.85
RFC3P40938 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.48□□□□□ -1.85
RFC3P40938 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.48□□□□□ -1.85
RFC3P40938 AC103710.3-201ENST00000608157 948 ntBASIC3.48□□□□□ -1.85
RFC3P40938 AC105429.2-201ENST00000610567 517 ntBASIC3.48□□□□□ -1.85
RFC3P40938 AC004777.1-201ENST00000624317 287 ntBASIC3.48□□□□□ -1.85
RFC3P40938 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RFC3P40938 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RFC3P40938 AC024560.2-201ENST00000507981 1497 ntBASIC3.47□□□□□ -1.85
RFC3P40938 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RFC3P40938 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
RFC3P40938 DCAF13P1-201ENST00000495256 1330 ntBASIC3.47□□□□□ -1.85
RFC3P40938 LINC00561-201ENST00000565815 2738 ntBASIC3.47□□□□□ -1.85
RFC3P40938 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RFC3P40938 METTL21EP-201ENST00000298105 713 ntBASIC3.47□□□□□ -1.85
RFC3P40938 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms