Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AP002453.2-201ENST00000533503 320 ntBASIC6.55□□□□□ -1.36
RXRBP28702 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.55□□□□□ -1.36
RXRBP28702 AK6P1-201ENST00000540219 478 ntBASIC6.55□□□□□ -1.36
RXRBP28702 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
RXRBP28702 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.55□□□□□ -1.36
RXRBP28702 ATP5F1P7-201ENST00000567330 760 ntBASIC6.55□□□□□ -1.36
RXRBP28702 AC008739.3-201ENST00000603262 127 ntBASIC6.55□□□□□ -1.36
RXRBP28702 AC069209.1-201ENST00000619282 651 ntBASIC6.55□□□□□ -1.36
RXRBP28702 AP000843.1-201ENST00000624880 701 ntBASIC6.55□□□□□ -1.36
RXRBP28702 AC120349.2-201ENST00000625002 298 ntBASIC6.55□□□□□ -1.36
RXRBP28702 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RXRBP28702 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RXRBP28702 RAD17P1-201ENST00000418130 2042 ntBASIC6.55□□□□□ -1.36
RXRBP28702 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.55□□□□□ -1.36
RXRBP28702 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.55□□□□□ -1.36
RXRBP28702 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.54□□□□□ -1.36
RXRBP28702 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RXRBP28702 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RXRBP28702 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RXRBP28702 SNORD65.1-201ENST00000390889 71 ntBASIC6.54□□□□□ -1.36
RXRBP28702 RNU6-780P-201ENST00000391030 104 ntBASIC6.54□□□□□ -1.36
RXRBP28702 RNU6-628P-201ENST00000410675 107 ntBASIC6.54□□□□□ -1.36
RXRBP28702 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.54□□□□□ -1.36
RXRBP28702 AL365184.2-201ENST00000431139 435 ntBASIC6.54□□□□□ -1.36
RXRBP28702 AL132765.1-201ENST00000434165 553 ntBASIC6.54□□□□□ -1.36
RXRBP28702 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.54□□□□□ -1.36
RXRBP28702 AL450263.2-201ENST00000439400 589 ntBASIC6.54□□□□□ -1.36
RXRBP28702 AC244505.5-201ENST00000443639 207 ntBASIC6.54□□□□□ -1.36
RXRBP28702 AC097499.1-201ENST00000444277 208 ntBASIC6.54□□□□□ -1.36
RXRBP28702 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.54□□□□□ -1.36
RXRBP28702 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.54□□□□□ -1.36
RXRBP28702 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.54□□□□□ -1.36
RXRBP28702 SNORD125-201ENST00000459538 96 ntBASIC6.54□□□□□ -1.36
RXRBP28702 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.54□□□□□ -1.36
RXRBP28702 AC019235.1-201ENST00000503847 207 ntBASIC6.54□□□□□ -1.36
RXRBP28702 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.54□□□□□ -1.36
RXRBP28702 OR4C2P-201ENST00000530855 1064 ntBASIC6.54□□□□□ -1.36
RXRBP28702 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.54□□□□□ -1.36
RXRBP28702 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.54□□□□□ -1.36
RXRBP28702 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.54□□□□□ -1.36
RXRBP28702 AC008752.3-201ENST00000588113 712 ntBASIC6.54□□□□□ -1.36
RXRBP28702 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.54□□□□□ -1.36
RXRBP28702 AC060780.3-201ENST00000589464 80 ntBASIC6.54□□□□□ -1.36
RXRBP28702 IPO5P1-202ENST00000600039 287 ntBASIC6.54□□□□□ -1.36
RXRBP28702 AL160281.1-201ENST00000605307 311 ntBASIC6.54□□□□□ -1.36
RXRBP28702 AL442067.2-201ENST00000614033 363 ntBASIC6.54□□□□□ -1.36
RXRBP28702 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC6.54□□□□□ -1.36
RXRBP28702 OR8G7P-201ENST00000616658 848 ntBASIC6.54□□□□□ -1.36
RXRBP28702 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 MTCO1P23-201ENST00000415223 1526 ntBASIC6.54□□□□□ -1.36
RXRBP28702 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 SPATA2P1-201ENST00000431223 2055 ntBASIC6.54□□□□□ -1.36
RXRBP28702 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RXRBP28702 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRBP28702 Z99496.1-201ENST00000469424 1477 ntBASIC6.53□□□□□ -1.36
RXRBP28702 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.53□□□□□ -1.36
RXRBP28702 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.53□□□□□ -1.36
RXRBP28702 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRBP28702 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRBP28702 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRBP28702 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRBP28702 RNU6-1090P-201ENST00000364065 94 ntBASIC6.53□□□□□ -1.36
RXRBP28702 RNU11-201ENST00000387069 134 ntBASIC6.53□□□□□ -1.36
RXRBP28702 RNU6-332P-201ENST00000391193 108 ntBASIC6.53□□□□□ -1.36
RXRBP28702 RPL31P1-201ENST00000398116 372 ntBASIC6.53□□□□□ -1.36
RXRBP28702 CALM2P3-201ENST00000400429 449 ntBASIC6.53□□□□□ -1.36
RXRBP28702 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.53□□□□□ -1.36
RXRBP28702 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.53□□□□□ -1.36
RXRBP28702 AC073464.1-201ENST00000429823 534 ntBASIC6.53□□□□□ -1.36
RXRBP28702 MTCYBP45-201ENST00000435243 565 ntBASIC6.53□□□□□ -1.36
RXRBP28702 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC6.53□□□□□ -1.36
RXRBP28702 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRBP28702 AC002542.1-201ENST00000440683 193 ntBASIC6.53□□□□□ -1.36
RXRBP28702 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRBP28702 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.53□□□□□ -1.36
RXRBP28702 REG1CP-206ENST00000447469 496 ntBASIC6.53□□□□□ -1.36
RXRBP28702 OR6K1P-201ENST00000456766 971 ntBASIC6.53□□□□□ -1.36
RXRBP28702 RN7SL189P-201ENST00000468631 289 ntBASIC6.53□□□□□ -1.36
RXRBP28702 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.53□□□□□ -1.36
RXRBP28702 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRBP28702 SCARNA20.4-201ENST00000516969 131 ntBASIC6.53□□□□□ -1.36
RXRBP28702 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRBP28702 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.53□□□□□ -1.36
RXRBP28702 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms