Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH3P22223 AC092653.1-201ENST00000608509 531 ntBASIC4.16□□□□□ -1.74
CDH3P22223 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH3P22223 AL157392.4-201ENST00000609756 345 ntBASIC4.16□□□□□ -1.74
CDH3P22223 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH3P22223 AL138721.1-201ENST00000616756 179 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AL445567.2-201ENST00000618935 498 ntBASIC4.16□□□□□ -1.74
CDH3P22223 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH3P22223 AC017104.5-201ENST00000637647 639 ntBASIC4.16□□□□□ -1.74
CDH3P22223 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH3P22223 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH3P22223 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CDH3P22223 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH3P22223 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.15□□□□□ -1.74
CDH3P22223 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH3P22223 AC111188.2-201ENST00000529697 1387 ntBASIC4.15□□□□□ -1.74
CDH3P22223 NOL8P1-201ENST00000508336 3529 ntBASIC4.15□□□□□ -1.74
CDH3P22223 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.15□□□□□ -1.74
CDH3P22223 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH3P22223 RNA5SP36-201ENST00000410197 133 ntBASIC4.15□□□□□ -1.75
CDH3P22223 RNA5SP306-201ENST00000411087 107 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH3P22223 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH3P22223 BTF3P8-201ENST00000414577 526 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AC093698.1-201ENST00000423843 571 ntBASIC4.15□□□□□ -1.75
CDH3P22223 OR5AW1P-201ENST00000426334 1006 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AC092017.2-201ENST00000427600 362 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH3P22223 USP9YP7-201ENST00000436723 430 ntBASIC4.15□□□□□ -1.75
CDH3P22223 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH3P22223 GSTA7P-201ENST00000438425 448 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH3P22223 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH3P22223 HMGB3P22-202ENST00000451823 572 ntBASIC4.15□□□□□ -1.75
CDH3P22223 USP9YP32-201ENST00000452432 430 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH3P22223 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH3P22223 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH3P22223 RPL7P22-201ENST00000466005 733 ntBASIC4.15□□□□□ -1.75
CDH3P22223 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH3P22223 RPL30P11-201ENST00000495304 339 ntBASIC4.15□□□□□ -1.75
CDH3P22223 FTH1P24-201ENST00000503502 462 ntBASIC4.15□□□□□ -1.75
CDH3P22223 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH3P22223 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH3P22223 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH3P22223 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH3P22223 AC008958.1-201ENST00000511047 682 ntBASIC4.15□□□□□ -1.75
CDH3P22223 RNU6-416P-201ENST00000516265 103 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH3P22223 AC008562.1-201ENST00000521763 330 ntBASIC4.15□□□□□ -1.75
CDH3P22223 COX6B1P6-201ENST00000522347 255 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.15□□□□□ -1.75
CDH3P22223 AC124068.1-201ENST00000563131 678 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH3P22223 MTCO2P2-201ENST00000591258 225 ntBASIC4.15□□□□□ -1.75
CDH3P22223 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDH3P22223 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH3P22223 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH3P22223 VN1R88P-201ENST00000596787 292 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH3P22223 RPP40P2-201ENST00000603596 712 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AC009948.4-201ENST00000604692 675 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AL049634.3-201ENST00000604968 457 ntBASIC4.15□□□□□ -1.75
CDH3P22223 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH3P22223 AC105429.2-201ENST00000610567 517 ntBASIC4.15□□□□□ -1.75
CDH3P22223 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH3P22223 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH3P22223 VN1R7P-201ENST00000619242 903 ntBASIC4.15□□□□□ -1.75
CDH3P22223 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH3P22223 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH3P22223 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CDH3P22223 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH3P22223 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CDH3P22223 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CDH3P22223 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH3P22223 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH3P22223 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CDH3P22223 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH3P22223 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH3P22223 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH3P22223 RNU1-15P-201ENST00000353977 144 ntBASIC4.14□□□□□ -1.75
CDH3P22223 RN7SKP227-201ENST00000364445 330 ntBASIC4.14□□□□□ -1.75
CDH3P22223 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CDH3P22223 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH3P22223 SNORA70C-201ENST00000384538 135 ntBASIC4.14□□□□□ -1.75
CDH3P22223 MIR525-201ENST00000384978 85 ntBASIC4.14□□□□□ -1.75
CDH3P22223 RPS26P8-201ENST00000393490 348 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AL583835.1-201ENST00000399570 407 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AL138878.1-201ENST00000405131 347 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AC004022.2-201ENST00000413824 193 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH3P22223 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH3P22223 C1DP1-201ENST00000426049 402 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH3P22223 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH3P22223 MTCYBP15-201ENST00000433123 1127 ntBASIC4.14□□□□□ -1.75
CDH3P22223 GTF2IP3-201ENST00000433887 494 ntBASIC4.14□□□□□ -1.75
CDH3P22223 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH3P22223 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH3P22223 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms