Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
ERCC3P19447 U3.10-201ENST00000364459 214 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 RNU1-106P-201ENST00000384382 164 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ERCC3P19447 BTF3P7-201ENST00000407097 488 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 RPS27AP6-201ENST00000427962 448 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 OR51AB1P-201ENST00000429046 620 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.33□□□□□ -1.4
ERCC3P19447 AC127537.2-201ENST00000439258 465 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC3P19447 NOP56P2-201ENST00000447491 769 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC3P19447 AC010733.1-201ENST00000451515 401 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 RPS7P7-201ENST00000463499 571 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ERCC3P19447 AC022034.3-201ENST00000471393 478 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC6.33□□□□□ -1.4
ERCC3P19447 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.33□□□□□ -1.4
ERCC3P19447 RPSAP51-201ENST00000497462 645 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.33□□□□□ -1.4
ERCC3P19447 AC006390.1-201ENST00000508068 283 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC3P19447 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.33□□□□□ -1.4
ERCC3P19447 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.33□□□□□ -1.4
ERCC3P19447 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.33□□□□□ -1.4
ERCC3P19447 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.33□□□□□ -1.4
ERCC3P19447 AC022483.1-201ENST00000514020 567 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 AP003467.2-201ENST00000520175 319 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.33□□□□□ -1.4
ERCC3P19447 PTP4A1P6-201ENST00000531034 478 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 AC068993.1-201ENST00000546724 589 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 AL163952.1-202ENST00000569625 600 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.33□□□□□ -1.4
ERCC3P19447 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.33□□□□□ -1.4
ERCC3P19447 Mico1.1-201ENST00000611698 204 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC6.33□□□□□ -1.4
ERCC3P19447 AC010149.2-201ENST00000637608 315 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
ERCC3P19447 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ERCC3P19447 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC3P19447 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC3P19447 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
ERCC3P19447 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC3P19447 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.33□□□□□ -1.4
ERCC3P19447 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC3P19447 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC3P19447 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC3P19447 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC3P19447 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC3P19447 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC3P19447 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
ERCC3P19447 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC3P19447 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
ERCC3P19447 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ERCC3P19447 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC3P19447 SNORA67-201ENST00000384423 137 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 AL133270.1-201ENST00000402635 279 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 MRPL42P2-201ENST00000403169 426 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 AL133388.1-201ENST00000404509 287 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC3P19447 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC3P19447 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC3P19447 PSMA2P3-201ENST00000429685 675 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 AL358934.1-201ENST00000432346 324 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 AL596276.1-201ENST00000434465 418 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 MTCYBP45-201ENST00000435243 565 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 PSMD10P3-201ENST00000437000 448 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 RPL17P49-201ENST00000443728 411 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 CEACAMP7-201ENST00000444105 496 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 MTND4P18-201ENST00000447010 465 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 AC004980.3-201ENST00000447046 365 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
ERCC3P19447 snoU13.8-201ENST00000458890 104 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC3P19447 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC3P19447 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC3P19447 RN7SKP82-201ENST00000516786 223 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.32□□□□□ -1.4
ERCC3P19447 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC3P19447 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
ERCC3P19447 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC3P19447 HMGN1P30-201ENST00000589286 268 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
ERCC3P19447 NANOGP3-201ENST00000605855 286 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 OR10AB1P-201ENST00000609613 938 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC3P19447 AC109583.2-201ENST00000617367 129 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 CR381653.2-201ENST00000624041 768 ntBASIC6.32□□□□□ -1.4
ERCC3P19447 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC3P19447 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC3P19447 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.32□□□□□ -1.4
ERCC3P19447 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC3P19447 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC3P19447 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.31□□□□□ -1.4
ERCC3P19447 FARSBP1-201ENST00000435808 1778 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
ERCC3P19447 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC3P19447 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.31□□□□□ -1.4
ERCC3P19447 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms