Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AP004247.3-201ENST00000608682 624 ntBASIC4.83□□□□□ -1.64
CYP3A4P08684 LINC00901.1-201ENST00000617252 152 ntBASIC4.83□□□□□ -1.64
CYP3A4P08684 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.83□□□□□ -1.64
CYP3A4P08684 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.83□□□□□ -1.64
CYP3A4P08684 AC009039.2-201ENST00000624524 529 ntBASIC4.83□□□□□ -1.64
CYP3A4P08684 CR392039.4-201ENST00000624968 501 ntBASIC4.83□□□□□ -1.64
CYP3A4P08684 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.83□□□□□ -1.64
CYP3A4P08684 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CYP3A4P08684 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CYP3A4P08684 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CYP3A4P08684 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CYP3A4P08684 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CYP3A4P08684 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.82□□□□□ -1.64
CYP3A4P08684 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.82□□□□□ -1.64
CYP3A4P08684 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CYP3A4P08684 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.82□□□□□ -1.64
CYP3A4P08684 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CYP3A4P08684 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.82□□□□□ -1.64
CYP3A4P08684 AC139713.2-215ENST00000641428 5037 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CYP3A4P08684 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CYP3A4P08684 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CYP3A4P08684 SNORD113-6-201ENST00000363345 75 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 Y_RNA.169-201ENST00000363745 96 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 Y_RNA.192-201ENST00000363977 102 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
CYP3A4P08684 SNORD65.1-201ENST00000390889 71 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 TAF9BP1-201ENST00000396646 746 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 AL356131.1-201ENST00000405826 414 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.82□□□□□ -1.64
CYP3A4P08684 AC009237.10-201ENST00000414112 510 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 MTND2P18-201ENST00000419962 1030 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 MRPS36P1-201ENST00000421291 307 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.82□□□□□ -1.64
CYP3A4P08684 AC093155.1-201ENST00000440164 826 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 RPL23AP76-201ENST00000441860 458 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 AC004865.1-201ENST00000442276 1003 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CYP3A4P08684 RPL5P30-201ENST00000465511 891 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.82□□□□□ -1.64
CYP3A4P08684 RPS27P23-201ENST00000487608 251 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 RPS27AP13-201ENST00000498403 237 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.82□□□□□ -1.64
CYP3A4P08684 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.82□□□□□ -1.64
CYP3A4P08684 AC116353.3-201ENST00000511215 249 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 AC109471.1-201ENST00000511631 612 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 AC008837.2-201ENST00000513076 418 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CYP3A4P08684 MTND2P26-201ENST00000528255 1029 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 AC100770.1-201ENST00000532310 322 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.82□□□□□ -1.64
CYP3A4P08684 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.82□□□□□ -1.64
CYP3A4P08684 ARF4P1-201ENST00000605447 541 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.82□□□□□ -1.64
CYP3A4P08684 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 AC090246.1-201ENST00000616499 426 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 AC022893.2-201ENST00000564832 3296 ntBASIC4.82□□□□□ -1.64
CYP3A4P08684 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CYP3A4P08684 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CYP3A4P08684 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.81□□□□□ -1.64
CYP3A4P08684 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CYP3A4P08684 AC022031.1-201ENST00000585985 2593 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CYP3A4P08684 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CYP3A4P08684 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CYP3A4P08684 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CYP3A4P08684 RNU4-40P-201ENST00000364351 143 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CYP3A4P08684 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CYP3A4P08684 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.81□□□□□ -1.64
CYP3A4P08684 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.81□□□□□ -1.64
CYP3A4P08684 RN7SKP182-201ENST00000410772 298 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.81□□□□□ -1.64
CYP3A4P08684 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CYP3A4P08684 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.81□□□□□ -1.64
CYP3A4P08684 PAICSP7-201ENST00000419829 962 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.81□□□□□ -1.64
CYP3A4P08684 COX6CP15-201ENST00000426313 211 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 USP9YP31-201ENST00000431405 881 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 ATP5F1P1-201ENST00000433775 569 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 AC092393.1-201ENST00000439625 742 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.81□□□□□ -1.64
CYP3A4P08684 AL133477.1-201ENST00000457472 514 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 RNA5SP246-201ENST00000458909 119 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 APOOP2-201ENST00000461561 539 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.81□□□□□ -1.64
CYP3A4P08684 RPS3AP22-201ENST00000488297 769 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 AC048346.1-201ENST00000510247 144 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 AC008694.2-201ENST00000517591 306 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 DYNLL1P4-201ENST00000549314 266 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.81□□□□□ -1.64
CYP3A4P08684 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.81□□□□□ -1.64
CYP3A4P08684 TVP23BP1-201ENST00000557500 617 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 AC087465.1-201ENST00000560574 245 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.81□□□□□ -1.64
CYP3A4P08684 RN7SL176P-201ENST00000580352 264 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 AC090312.1-201ENST00000580637 348 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 AC008088.1-201ENST00000580993 280 ntBASIC4.81□□□□□ -1.64
CYP3A4P08684 RN7SL600P-201ENST00000581811 299 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms