Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC011276.1-201ENST00000469688 323 ntBASIC3.17□□□□□ -1.9
CD74P04233 CYCSP20-201ENST00000473154 315 ntBASIC3.17□□□□□ -1.9
CD74P04233 AC103987.1-201ENST00000473394 348 ntBASIC3.17□□□□□ -1.9
CD74P04233 FCF1P3-201ENST00000496394 590 ntBASIC3.17□□□□□ -1.9
CD74P04233 AC108475.1-201ENST00000507880 950 ntBASIC3.17□□□□□ -1.9
CD74P04233 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.17□□□□□ -1.9
CD74P04233 AC106806.2-201ENST00000509365 500 ntBASIC3.17□□□□□ -1.9
CD74P04233 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CD74P04233 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CD74P04233 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.17□□□□□ -1.9
CD74P04233 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.17□□□□□ -1.9
CD74P04233 AP001636.2-201ENST00000525517 696 ntBASIC3.17□□□□□ -1.9
CD74P04233 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.17□□□□□ -1.9
CD74P04233 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.17□□□□□ -1.9
CD74P04233 CKS1BP1-201ENST00000555221 240 ntBASIC3.17□□□□□ -1.9
CD74P04233 TGIF1P1-201ENST00000558095 802 ntBASIC3.17□□□□□ -1.9
CD74P04233 AC006960.3-201ENST00000561845 705 ntBASIC3.17□□□□□ -1.9
CD74P04233 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.17□□□□□ -1.9
CD74P04233 AL590392.1-201ENST00000604960 446 ntBASIC3.17□□□□□ -1.9
CD74P04233 AC092653.1-201ENST00000608509 531 ntBASIC3.17□□□□□ -1.9
CD74P04233 AL450489.1-201ENST00000612071 468 ntBASIC3.17□□□□□ -1.9
CD74P04233 MIR6716-201ENST00000613413 80 ntBASIC3.17□□□□□ -1.9
CD74P04233 AL118556.2-201ENST00000614375 824 ntBASIC3.17□□□□□ -1.9
CD74P04233 MLECP1-201ENST00000615893 709 ntBASIC3.17□□□□□ -1.9
CD74P04233 MIR6864-201ENST00000617935 70 ntBASIC3.17□□□□□ -1.9
CD74P04233 AL121890.3-201ENST00000618494 516 ntBASIC3.17□□□□□ -1.9
CD74P04233 MIR8059-201ENST00000620427 81 ntBASIC3.17□□□□□ -1.9
CD74P04233 MIR4496-201ENST00000635896 61 ntBASIC3.17□□□□□ -1.9
CD74P04233 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD74P04233 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CD74P04233 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CD74P04233 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD74P04233 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.16□□□□□ -1.9
CD74P04233 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CD74P04233 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CD74P04233 RAD1P1-201ENST00000231383 813 ntBASIC3.16□□□□□ -1.9
CD74P04233 AL589826.1-201ENST00000340697 249 ntBASIC3.16□□□□□ -1.9
CD74P04233 SNORD115-48-201ENST00000364764 76 ntBASIC3.16□□□□□ -1.9
CD74P04233 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CD74P04233 MTCO3P31-201ENST00000405526 789 ntBASIC3.16□□□□□ -1.9
CD74P04233 RNU6-55P-201ENST00000411092 107 ntBASIC3.16□□□□□ -1.9
CD74P04233 RNU6-954P-201ENST00000411355 107 ntBASIC3.16□□□□□ -1.9
CD74P04233 AC010385.1-201ENST00000412374 256 ntBASIC3.16□□□□□ -1.9
CD74P04233 EI24P1-201ENST00000416584 867 ntBASIC3.16□□□□□ -1.9
CD74P04233 AC108032.1-201ENST00000416706 207 ntBASIC3.16□□□□□ -1.9
CD74P04233 AL049610.1-201ENST00000423374 372 ntBASIC3.16□□□□□ -1.9
CD74P04233 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.16□□□□□ -1.9
CD74P04233 AL160175.1-201ENST00000428124 247 ntBASIC3.16□□□□□ -1.9
CD74P04233 AL158071.1-201ENST00000430315 461 ntBASIC3.16□□□□□ -1.9
CD74P04233 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.16□□□□□ -1.9
CD74P04233 Z74696.2-201ENST00000436514 498 ntBASIC3.16□□□□□ -1.9
CD74P04233 AC074367.1-201ENST00000438685 1125 ntBASIC3.16□□□□□ -1.9
CD74P04233 CBX1P1-201ENST00000440184 427 ntBASIC3.16□□□□□ -1.9
CD74P04233 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD74P04233 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.16□□□□□ -1.9
CD74P04233 AC099563.1-201ENST00000456086 418 ntBASIC3.16□□□□□ -1.9
CD74P04233 RPL6P9-201ENST00000466502 859 ntBASIC3.16□□□□□ -1.9
CD74P04233 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD74P04233 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.16□□□□□ -1.9
CD74P04233 AC005351.1-201ENST00000511152 786 ntBASIC3.16□□□□□ -1.9
CD74P04233 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.16□□□□□ -1.9
CD74P04233 NDUFB9P3-201ENST00000521269 501 ntBASIC3.16□□□□□ -1.9
CD74P04233 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 AC004923.2-201ENST00000529649 369 ntBASIC3.16□□□□□ -1.9
CD74P04233 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.16□□□□□ -1.9
CD74P04233 OR5D17P-201ENST00000531492 978 ntBASIC3.16□□□□□ -1.9
CD74P04233 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 OR8L1P-201ENST00000534005 955 ntBASIC3.16□□□□□ -1.9
CD74P04233 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CD74P04233 AC011602.1-201ENST00000546484 331 ntBASIC3.16□□□□□ -1.9
CD74P04233 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.16□□□□□ -1.9
CD74P04233 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.16□□□□□ -1.9
CD74P04233 AC006254.3-201ENST00000603353 884 ntBASIC3.16□□□□□ -1.9
CD74P04233 AC090425.2-201ENST00000608818 501 ntBASIC3.16□□□□□ -1.9
CD74P04233 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD74P04233 AL356490.1-201ENST00000623079 479 ntBASIC3.16□□□□□ -1.9
CD74P04233 AC073530.2-201ENST00000623987 261 ntBASIC3.16□□□□□ -1.9
CD74P04233 HPVC1-201ENST00000629899 1198 ntBASIC3.16□□□□□ -1.9
CD74P04233 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD74P04233 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD74P04233 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD74P04233 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.16□□□□□ -1.9
CD74P04233 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CD74P04233 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CD74P04233 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CD74P04233 AC138915.3-201ENST00000562908 1389 ntBASIC3.15□□□□□ -1.9
CD74P04233 AL021368.2-201ENST00000606125 5352 ntBASIC3.15□□□□□ -1.9
CD74P04233 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CD74P04233 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.15□□□□□ -1.9
CD74P04233 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms