Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC017078.1-201ENST00000416146 368 ntBASIC3.81□□□□□ -1.8
COL4A1P02462 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL4A1P02462 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL4A1P02462 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL4A1P02462 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.81□□□□□ -1.8
COL4A1P02462 GTF3AP2-201ENST00000557014 266 ntBASIC3.81□□□□□ -1.8
COL4A1P02462 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.81□□□□□ -1.8
COL4A1P02462 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.81□□□□□ -1.8
COL4A1P02462 MIR7106-201ENST00000612419 65 ntBASIC3.81□□□□□ -1.8
COL4A1P02462 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL4A1P02462 AL137790.1-201ENST00000634283 177 ntBASIC3.81□□□□□ -1.8
COL4A1P02462 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL4A1P02462 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.8□□□□□ -1.8
COL4A1P02462 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL4A1P02462 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.8□□□□□ -1.8
COL4A1P02462 VN1R51P-201ENST00000411675 945 ntBASIC3.8□□□□□ -1.8
COL4A1P02462 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.8□□□□□ -1.8
COL4A1P02462 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.8□□□□□ -1.8
COL4A1P02462 AC108938.1-201ENST00000451204 136 ntBASIC3.8□□□□□ -1.8
COL4A1P02462 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.8□□□□□ -1.8
COL4A1P02462 AL136097.1-201ENST00000456945 913 ntBASIC3.8□□□□□ -1.8
COL4A1P02462 RPL23AP67-201ENST00000465341 474 ntBASIC3.8□□□□□ -1.8
COL4A1P02462 AC026801.2-201ENST00000515352 425 ntBASIC3.8□□□□□ -1.8
COL4A1P02462 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.8□□□□□ -1.8
COL4A1P02462 AC079600.2-201ENST00000550076 130 ntBASIC3.8□□□□□ -1.8
COL4A1P02462 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.8□□□□□ -1.8
COL4A1P02462 IGHV3-29-201ENST00000604817 344 ntBASIC3.8□□□□□ -1.8
COL4A1P02462 uc_338.1-201ENST00000612113 180 ntBASIC3.8□□□□□ -1.8
COL4A1P02462 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.8□□□□□ -1.8
COL4A1P02462 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
COL4A1P02462 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.8□□□□□ -1.8
COL4A1P02462 AC020633.1-201ENST00000468439 2247 ntBASIC3.79□□□□□ -1.8
COL4A1P02462 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL4A1P02462 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL4A1P02462 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
COL4A1P02462 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL4A1P02462 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL4A1P02462 GLRXP1-201ENST00000423261 334 ntBASIC3.79□□□□□ -1.8
COL4A1P02462 RPL12P26-201ENST00000452430 487 ntBASIC3.79□□□□□ -1.8
COL4A1P02462 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.79□□□□□ -1.8
COL4A1P02462 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL4A1P02462 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.79□□□□□ -1.8
COL4A1P02462 AC233280.2-201ENST00000603917 1070 ntBASIC3.79□□□□□ -1.8
COL4A1P02462 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.79□□□□□ -1.8
COL4A1P02462 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.79□□□□□ -1.8
COL4A1P02462 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
COL4A1P02462 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL4A1P02462 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL4A1P02462 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
COL4A1P02462 XGY1-201ENST00000381172 446 ntBASIC3.78□□□□□ -1.8
COL4A1P02462 CST9LP2-201ENST00000437612 320 ntBASIC3.78□□□□□ -1.8
COL4A1P02462 HMGB3P11-201ENST00000440127 604 ntBASIC3.78□□□□□ -1.8
COL4A1P02462 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.78□□□□□ -1.8
COL4A1P02462 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.78□□□□□ -1.8
COL4A1P02462 S100A11P1-201ENST00000477525 312 ntBASIC3.78□□□□□ -1.8
COL4A1P02462 AC010653.1-201ENST00000571108 881 ntBASIC3.78□□□□□ -1.8
COL4A1P02462 AL390838.2-201ENST00000602394 274 ntBASIC3.78□□□□□ -1.8
COL4A1P02462 AC099506.2-201ENST00000623074 221 ntBASIC3.78□□□□□ -1.8
COL4A1P02462 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.78□□□□□ -1.8
COL4A1P02462 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL4A1P02462 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
COL4A1P02462 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL4A1P02462 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
COL4A1P02462 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.78□□□□□ -1.8
COL4A1P02462 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.78□□□□□ -1.8
COL4A1P02462 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
COL4A1P02462 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL4A1P02462 BX679664.1-201ENST00000434429 253 ntBASIC3.78□□□□□ -1.81
COL4A1P02462 AC112653.1-201ENST00000443851 386 ntBASIC3.78□□□□□ -1.81
COL4A1P02462 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.78□□□□□ -1.81
COL4A1P02462 AC239809.1-201ENST00000450470 217 ntBASIC3.78□□□□□ -1.81
COL4A1P02462 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.78□□□□□ -1.81
COL4A1P02462 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.78□□□□□ -1.81
COL4A1P02462 AP001207.2-201ENST00000519490 539 ntBASIC3.78□□□□□ -1.81
COL4A1P02462 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.78□□□□□ -1.81
COL4A1P02462 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.78□□□□□ -1.81
COL4A1P02462 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL4A1P02462 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.77□□□□□ -1.81
COL4A1P02462 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.77□□□□□ -1.81
COL4A1P02462 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL4A1P02462 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
COL4A1P02462 AL022311.1-201ENST00000623726 19416 ntBASIC3.77□□□□□ -1.81
COL4A1P02462 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
COL4A1P02462 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL4A1P02462 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL4A1P02462 SSR1P1-201ENST00000407630 814 ntBASIC3.77□□□□□ -1.81
COL4A1P02462 RNA5SP31-201ENST00000411144 127 ntBASIC3.77□□□□□ -1.81
COL4A1P02462 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.77□□□□□ -1.81
COL4A1P02462 AC108734.1-201ENST00000439549 399 ntBASIC3.77□□□□□ -1.81
COL4A1P02462 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.77□□□□□ -1.81
COL4A1P02462 Z99127.3-201ENST00000448158 395 ntBASIC3.77□□□□□ -1.81
COL4A1P02462 CCDC75P1-201ENST00000469247 791 ntBASIC3.77□□□□□ -1.81
COL4A1P02462 RPL5P23-201ENST00000496040 868 ntBASIC3.77□□□□□ -1.81
COL4A1P02462 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.77□□□□□ -1.81
COL4A1P02462 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.77□□□□□ -1.81
COL4A1P02462 AC015871.2-201ENST00000603605 948 ntBASIC3.77□□□□□ -1.81
COL4A1P02462 ATP1B3P1-201ENST00000605365 821 ntBASIC3.77□□□□□ -1.81
COL4A1P02462 AC107294.1-201ENST00000609524 467 ntBASIC3.77□□□□□ -1.81
COL4A1P02462 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
COL4A1P02462 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms