Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 EI24P3-201ENST00000399046 1062 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.3□□□□□ -1.4
RAPGEF3O95398 RPL21P91-201ENST00000429231 479 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RAPGEF3O95398 CYCSP32-201ENST00000440548 321 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 PPIAP3-201ENST00000450588 505 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 DDX39BP2-208ENST00000453923 258 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 BX248409.1-201ENST00000455497 255 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 AL133244.1-201ENST00000456007 258 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.3□□□□□ -1.4
RAPGEF3O95398 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.3□□□□□ -1.4
RAPGEF3O95398 RPS4XP12-201ENST00000461747 709 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 GAPDHP39-201ENST00000481866 979 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RAPGEF3O95398 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.3□□□□□ -1.4
RAPGEF3O95398 AC093755.1-201ENST00000512950 1023 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 RNA5SP249-201ENST00000516127 99 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 IGJP1-201ENST00000522682 475 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 AL352979.3-201ENST00000553515 247 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 AC022884.3-201ENST00000579571 248 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 AL022161.1-201ENST00000604390 213 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 AP002360.3-201ENST00000607673 710 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 AC105227.2-201ENST00000615075 605 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RAPGEF3O95398 AC022509.4-201ENST00000621404 572 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
RAPGEF3O95398 AC092608.3-201ENST00000625017 386 ntBASIC6.3□□□□□ -1.4
RAPGEF3O95398 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.3□□□□□ -1.4
RAPGEF3O95398 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAPGEF3O95398 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RAPGEF3O95398 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RAPGEF3O95398 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RAPGEF3O95398 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.3□□□□□ -1.4
RAPGEF3O95398 AP002512.4-202ENST00000641599 4530 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAPGEF3O95398 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAPGEF3O95398 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAPGEF3O95398 RNU6-707P-201ENST00000364647 95 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 HMGB1P45-201ENST00000435986 653 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAPGEF3O95398 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAPGEF3O95398 RPS20P21-201ENST00000466859 343 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 OR5H4P-201ENST00000510851 923 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 IGKV2D-19-201ENST00000523346 262 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC027807.1-201ENST00000559921 996 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 NIFKP8-201ENST00000560500 874 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC090888.1-201ENST00000561335 1141 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC091178.1-203ENST00000584586 279 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 MIR3922-201ENST00000585192 84 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 BNIP3P26-201ENST00000600827 554 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RAPGEF3O95398 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAPGEF3O95398 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAPGEF3O95398 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAPGEF3O95398 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RAPGEF3O95398 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAPGEF3O95398 AL359922.3-201ENST00000624779 1670 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC116667.1-201ENST00000604855 2072 ntBASIC6.29□□□□□ -1.4
RAPGEF3O95398 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
RAPGEF3O95398 AL592182.3-201ENST00000642132 3304 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 RPL21P17-201ENST00000397467 475 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 AC007435.1-201ENST00000421086 415 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 AL590609.2-201ENST00000421430 368 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 Z74021.1-201ENST00000423610 407 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 AC005345.1-201ENST00000431868 217 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 TMX2P1-201ENST00000436507 708 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 RPS26P30-201ENST00000443431 335 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 RN7SL323P-201ENST00000494712 295 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 AP001317.1-201ENST00000531194 960 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 AC092747.2-201ENST00000545069 983 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 AL358072.1-201ENST00000604156 575 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 AC069545.1-201ENST00000605671 358 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms